Gene Spea_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1819 
Symbol 
ID5662214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2221645 
End bp2222052 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID641236409 
Productcurli production assembly/transport component CsgF precursor 
Protein accessionYP_001501677 
Protein GI157961643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0321037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TAAAAAATGT CGTTATAGGA CTAGCTGTTA CAGCAGGTGG CGCCCAGGCA 
ACTCAATTGA CTTATACCCC CGTCAACCCA AACTTTGGCG GTAGTTACCT CAATGGTTCT
TATCTATTAT CTAACGCATC GGCGCAAAAT AAGCACTCAG GTGGTTCTAG CTATGTTCCG
CCTTCGGCAC TCGATCGTCT TGCCAGCTCT CTCGAGTCAC GCCTGATGAG TCAACTATTT
AATGATGCAG CAAATGGCGG TGAAGGATAT CTAAGAACCG ATGATTTCGA GATCCAAGTC
GTGAATGAAG ATGGTGCGTT ATTGGTACAT ATTACCGATG TTTTAACCGG TGAAACGACG
ATTATTGAAG TCGGCGGTAT TGTTGATAAC AGCACTGGAG AAGGCTAG
 
Protein sequence
MKIIKNVVIG LAVTAGGAQA TQLTYTPVNP NFGGSYLNGS YLLSNASAQN KHSGGSSYVP 
PSALDRLASS LESRLMSQLF NDAANGGEGY LRTDDFEIQV VNEDGALLVH ITDVLTGETT
IIEVGGIVDN STGEG