Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1819 |
Symbol | |
ID | 5662214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2221645 |
End bp | 2222052 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236409 |
Product | curli production assembly/transport component CsgF precursor |
Protein accession | YP_001501677 |
Protein GI | 157961643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0321037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA TAAAAAATGT CGTTATAGGA CTAGCTGTTA CAGCAGGTGG CGCCCAGGCA ACTCAATTGA CTTATACCCC CGTCAACCCA AACTTTGGCG GTAGTTACCT CAATGGTTCT TATCTATTAT CTAACGCATC GGCGCAAAAT AAGCACTCAG GTGGTTCTAG CTATGTTCCG CCTTCGGCAC TCGATCGTCT TGCCAGCTCT CTCGAGTCAC GCCTGATGAG TCAACTATTT AATGATGCAG CAAATGGCGG TGAAGGATAT CTAAGAACCG ATGATTTCGA GATCCAAGTC GTGAATGAAG ATGGTGCGTT ATTGGTACAT ATTACCGATG TTTTAACCGG TGAAACGACG ATTATTGAAG TCGGCGGTAT TGTTGATAAC AGCACTGGAG AAGGCTAG
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Protein sequence | MKIIKNVVIG LAVTAGGAQA TQLTYTPVNP NFGGSYLNGS YLLSNASAQN KHSGGSSYVP PSALDRLASS LESRLMSQLF NDAANGGEGY LRTDDFEIQV VNEDGALLVH ITDVLTGETT IIEVGGIVDN STGEG
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