Gene Spea_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1812 
Symbol 
ID5662207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2214696 
End bp2215076 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content45% 
IMG OID641236402 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_001501670 
Protein GI157961636 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.775653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGG TAGCATTATG TGATGAAGCT AAGTTGCCTA AGGGGCAAGG TGTAGCTGCT 
TGGCTTGATA ATCGAAAGAT CGCTTTGTTT AATTTGGGCG AGAAAGGCAT ATTTGCCCTC 
GATAATATTG ACCCCGCAAC TGGCGTTGCG GTGCTTTCAC GGGGACTCGT TTGTGAACTT 
AACGATGAAC TGTATGTAGC GTCACCTATT CATAAACAGC ATTATCATCT TTCCACAGGT 
CAGTGTTTAG AGAACGATGG ATTATCGGTT ATCTGCTATG AGTTAAAAAA AGAGCAAGGT 
AGGGTCCTCG CAAAATTGCC TTTTCAAGCT GCATGCGCGT CAGGCAGTGC TCTGTCCACC 
CCAGTAAAAG GAGCAAGGTA A
 
Protein sequence
MSWVALCDEA KLPKGQGVAA WLDNRKIALF NLGEKGIFAL DNIDPATGVA VLSRGLVCEL 
NDELYVASPI HKQHYHLSTG QCLENDGLSV ICYELKKEQG RVLAKLPFQA ACASGSALST 
PVKGAR