| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1801 |
|---|
| Symbol | |
|---|
| ID | 5662196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2199684 |
|---|
| End bp | 2200736 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641236391 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_001501659 |
|---|
| Protein GI | 157961625 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.757767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG TACAGCTAAG AAATAACTGG AAACGTGAAG AGATAGAAGC CTTATTTGCA
CTGCCGATGA ACGACCTTCT TTTTCAGGCG CATAGCATTC ATCGCCAAGA GTTTGATCCT
AACGAAGTTC AGGTCAGTCG TTTACTGTCG ATTAAAACCG GAGCTTGTCC TGAAGACTGT
AAATATTGTC CACAGAGTGC ACGCTATGAT ACAGGTCTTG AGAAAGAGCG CTTACTCGCG
ATGGAAACGG TATTAACCGA AGCGCGCAGT GCAAAAGCTG CGGGGGCATC ACGTTTCTGC
ATGGGAGCCG CTTGGCGCAA TCCAAAAGAA CGTGACATGC CATATCTGAA AACCATGGTT
GAAGAAGTAA AAGCGCTTGG TATGGAAACC TGTATGACCT TAGGCATGTT GTCAGCTGAA
CAAGCCAATA CGCTTGCAGA CGCAGGTTTA GATTATTACA ACCATAACTT AGATACCTCG
CCTGAATATT ATGGCGATGT CATCACTACC CGTACCTATC AGAGCCGCCT TGATACCTTA
ACTAACGTAC GAGCTTCAGG CATGAAAGTT TGCTCTGGTG GTATCGTAGG AATGGGCGAG
AAGGCCACCG ACAGAGCGGG ACTTATCCAG CAACTCGCTA ACTTAGAGCA ACATCCCGAT
TCTGTACCAA TTAATATGTT GGTGAAAGTT GAAGGTACGC CTTTTGAGAA ACTTGATGAT
CTCGACCCAT TAGAGTTTGT GCGCACGATT GCAGTAGCTC GAATTACTAT GCCTAAATCA
CGAGTTCGTT TATCTGCCGG TCGTGAAAAC ATGAGCGATG AGTTACAGGC TATGTGTTTC
TTTGCTGGCG CTAACTCAAT CTTTTACGGA TGTAAGTTAC TGACGACACC AAATCCAGAA
GAGAATGATG ATATGAGTCT GTTCAAACGT CTCGGTTTAC ATCCTGAGCA GGGTATTGCT
GCGACAAAAG AGCAAGATGA AGCCATGCTA GCTAAAGCAG CGGCACATCA GGATAAAAAG
TCAGCTGCAT TTTATGATGC TGGTGCGCTC TAA
|
|---|
| Protein sequence | MPEVQLRNNW KREEIEALFA LPMNDLLFQA HSIHRQEFDP NEVQVSRLLS IKTGACPEDC
KYCPQSARYD TGLEKERLLA METVLTEARS AKAAGASRFC MGAAWRNPKE RDMPYLKTMV
EEVKALGMET CMTLGMLSAE QANTLADAGL DYYNHNLDTS PEYYGDVITT RTYQSRLDTL
TNVRASGMKV CSGGIVGMGE KATDRAGLIQ QLANLEQHPD SVPINMLVKV EGTPFEKLDD
LDPLEFVRTI AVARITMPKS RVRLSAGREN MSDELQAMCF FAGANSIFYG CKLLTTPNPE
ENDDMSLFKR LGLHPEQGIA ATKEQDEAML AKAAAHQDKK SAAFYDAGAL
|
|---|
| |