Gene Spea_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1800 
Symbol 
ID5662195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2198094 
End bp2199434 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content46% 
IMG OID641236390 
Productadenosylmethionine-8-amino-7-oxononanoate aminotransferase 
Protein accessionYP_001501658 
Protein GI157961624 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000160977 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG ATAATCAATC TACAACAACA GGTATCGATC TTCAATTTGA TAGAGACCAC 
CTATGGCATC CCTACACTTC AATGGCCAAT GCGCTTCCCA CCTATGGCGT TGTATCTGCA
GAAGGTGTTG AACTCCAGCT AGAAGACGGC ACAAAGCTCA TTGACGGTAC CAGTTCATGG
TGGGCTTGTG TTCATGGTTA TAGTCACCCA AAAATCGTTG CTGCTATGCA ACAACAGACT
GCGCAATTGA GTCATGTGAT GTTTGGCGGA ATAACTCACC GCCCTGCCGT TGAACTTGCG
CGTCTACTTA TCGAAATGAC AAGCCCTAGG CTGACTAAGG TTTTTTTAGC CGACTCTGGT
TCAATTGCGG TTGAAGTCGC GATGAAGATG GCGCTGCAAT ACTGGCAAGG TAAGGCTAAA
CCTAATAAAC AGAAGATCCT GACTGTTAAG AATGGCTACC ATGGCGATAC TTTTGCCGCC
ATGAGTGTAT GCGATCCTGA AGGCGGCATG CACACCATGT TCGGTGAGTT AGTGACTAAA
CAGCTGTTTG CCCCTGCGCC TCAATCTCGT TTCGATGACG ACTTTAACCC AAAAGAACTC
AGCGAGATTG ACAACCTATT TGAAGATAAT CACCAACAGA TCGCCGCATT GCTCATTGAG
CCTATTATGC AAGGCGCTGG CGGTATGCGT TTCTATCATC CAGAATACTT ACGCTCGCTA
CGTAAACTGT GTGATAAATA TGACGTGCTG CTTATTCTCG ATGAAATTGC CACCGGCTTT
GGCCGAACAG GTAAATTGTT CGCCTATGAA CACAGCGGGA TTGAAGCTGA TATTTTATGC
TTAGGTAAGG CATTAACCGG TGGCTATATC TCTCTGGCCG CAACCATATG TAGCAACGAA
GTAGCCCAAG GAGTGAGTGA CTCGCCAGCA GGAGTGTTTA TGCATGGTCC TACCTTTATG
GGTAATCCAC TCGCCTGCTC TGCTGCTATC GCCAGTTTAG AGCTGCTTAA AGAAAATCGT
TGGCAAGGAC AGGTTCGCGC TATTGAATCT CAGCTCAAGC AGGAATTAGC CGACGCGATA
GACTACCCAA ATGTAAAAGA TGTTCGTGTA TTAGGCAGCA TTGGTGTGCT CGAAATGAAT
GCTACCCTCA ACACCGCTGA GCTACAGCAG CAGTTCGTCG ATCTAGGCGT TTGGATAAGA
CCATTTTCTA ACCTTATCTA TATCATGCCG CCATATTGCA TAAGTTCATC TCAGCTAAGC
AAATTAACCC ATGCAATGAA AACTGTGGCA AAACAGATCA GTTTACCCAA TGATACCAGT
GCTTTTATCA GTCATGGTTA A
 
Protein sequence
MSSDNQSTTT GIDLQFDRDH LWHPYTSMAN ALPTYGVVSA EGVELQLEDG TKLIDGTSSW 
WACVHGYSHP KIVAAMQQQT AQLSHVMFGG ITHRPAVELA RLLIEMTSPR LTKVFLADSG
SIAVEVAMKM ALQYWQGKAK PNKQKILTVK NGYHGDTFAA MSVCDPEGGM HTMFGELVTK
QLFAPAPQSR FDDDFNPKEL SEIDNLFEDN HQQIAALLIE PIMQGAGGMR FYHPEYLRSL
RKLCDKYDVL LILDEIATGF GRTGKLFAYE HSGIEADILC LGKALTGGYI SLAATICSNE
VAQGVSDSPA GVFMHGPTFM GNPLACSAAI ASLELLKENR WQGQVRAIES QLKQELADAI
DYPNVKDVRV LGSIGVLEMN ATLNTAELQQ QFVDLGVWIR PFSNLIYIMP PYCISSSQLS
KLTHAMKTVA KQISLPNDTS AFISHG