| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1787 |
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| Symbol | sdhB |
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| ID | 5662182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2181712 |
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| End bp | 2182419 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236377 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001501645 |
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| Protein GI | 157961611 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.177306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGCTAC AATCCTGATG TAGATACGAA GCCGTATATG
AAGGATTACA GCTTAGAAGT GGATGAAGGT ACTGACATGA TGGTACTGGA TGCACTTTTA
AAGCTTAAAG AGCTAGATCC AACACTGGCG TTTAGACGTT CATGCCGTGA AGGTGTATGT
GGCAGTGATG GTATCAACAT GAATGGTAAA AATGGACTCG CGTGTATCAC GCCTGTTTCT
ACCTTCACTG GAAAGAAGAT CGAAATCCGT CCGCTACCAG GCATGCCTGT TGTACGTGAT
TTGATTGTCG ACCTGACTCA GTTCTATACC CAGTATGAAA AGATAAAGCC TTTCTTGATT
AACGATGAAA AAACGCCTGC GCGTGAGCAT CTGCAGTCAC CGGAAGATCG TGAGCACTTA
GATGGACTCT ATGAGTGTAT TATGTGCGCA TGTTGTTCTA CGGCTTGTCC TTCGTTCTGG
TGGAACCCAG ATAAGTTCAT CGGTCCAAGT GGTTTGCTGC ATGCTTACCG TTTCTTGATC
GATAGCCGTG ATACGGCGAC TGAAGAGCGT TTATCTGGAC TCGATGATGC TTACAGCGTG
TTCCGCTGCC ACGGCATCAT GAACTGTGTT GACGTTTGTC CTAAAGGGCT TAATCCGACA
AAAGCAATTG GACATATCAA GTCTATGCTT CTGAAGAGAG CCGTTTAA
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| Protein sequence | MKLEFAVYRY NPDVDTKPYM KDYSLEVDEG TDMMVLDALL KLKELDPTLA FRRSCREGVC
GSDGINMNGK NGLACITPVS TFTGKKIEIR PLPGMPVVRD LIVDLTQFYT QYEKIKPFLI
NDEKTPAREH LQSPEDREHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSGLDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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