Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1763 |
Symbol | |
ID | 5664739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2143485 |
End bp | 2145269 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236353 |
Product | sulfatase |
Protein accession | YP_001501621 |
Protein GI | 157961587 |
COG category | [R] General function prediction only |
COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGAGC GACAAAAACA GATTGGACGT GATCGCGTTT CCCGCCTAGT AAGCTGGGGA CATTGGTTTG CCTTTATTAA TGGCCTACTT GCCATTATCG TTGGCTATCG CTATCTCGAC ACCATTGGGC TTCCCGAATC ATTTATTGGC TGGGGCTATT TAGTGATCAG CACAATAGGC CATTTTAGCT TCCTGGCTTT TATGGTCTAT TTGGTGTTTA TTTTCCCAAT AACCCTGTTA CTGCCTTACT CAAGGATCCT TAGAGGTTAT GCCGCCACGG TCGCAACACT GAGCCTATGC TTACTGCTCT ATGACACGGT AATTTATGAC GATTACGGCC TTCACCTAAG TCCTTTTGTT TTTGACCTCG CCTGGGCTGA CTTAAATGCC CTACTCCGAG GCACCTCATA CATTATTACG CCTCTTGCCA TTTTGGTGAT AGAGCTAACG CTGGCTAACT TCCTATGGAA GCGTGTCGAG AAGATCCGTA AGCGCAACGT TGGCAACAAG GTCGTTGTTT TAGTGGGGAT CTGCTTTGTC GCCAGTCACC TTATTCATAT CTGGGGTGAC GCTGCCGATG TGACCGAAAT TACCCATTTC GATGACGCTT ACCCACTGTC TTATCCTGCA ACGGCAAAAA GCTTAATGGA AAGCTACGGT ATTGAAGGTA GTCGGGACCA TAGAAGTCAG ACGCCTCCTA AGGCTAGCCT GCAGTATCCC TTGTCACCTA TGCAGTGCAC TGCCGATAGC CTGCCAAATA TTTTAGTCAT TGCGGTAGAT AGCTTGCGTG CCGATCTTGT CGATGAGTCT ACGATGCCAT TTCTGTCGTC CTACGCGCAA CAAAACATGA ATTTCACTAA GCATCTCAGT GGTGGAAATC AGTTTAACAG TGGTATGTTT AGCCTACTTT ATGCACTGCA AGGCAGCTAC TCCAATGCAG TCGATCTACA TTATCAAAGC CCGGTATTAA CCCAGGAGCT AGCCGCTAAA GGTTATGACT TAGGCCTATT TACCACCCAA GATACACTCC CTGCGCCTCT GGCCATATTT GATGATTTCG AGCGAGTCGA CGCCGAGCAC ATCAATAGCT ATGCAATATC GGATCTGCAA TCTATCGCTA ACTGGCAGCA ATGGACTGGC TCGGCGAGCC AACCTTGGTT TAGTTTACTC AATCTCAAAT CTCCCGATAG TTATGATACG CCGATTGGCT TTCTAGGGAT CAAAACAGTT CAGTCTTCCT CTAAGTTAAA GCCTGCTCAA AAAGTGCTAT TTAACCAATA CCGCCAATCG CTTAACTTTA TTGATAAACA GATTGAATCG GTTGTTAATA ATCTGCCTAA AGGCACTATG GTGGTGATTA CGGGCGTTAA CGGTAAAATG TTTACCAGTA ACTCTGACGA GGAACGCGTT AACCTGTCTC CAGACAGTGT CCGTGTGCCA ATGATCATTC ACTGGCCCAA CGAAGAGTCA GCTAAACAGA TAAAGTATCG CACCACACAC AATGGCCTAG TACCTGCTAT TTTAACTCAA ACTTTAGGAT GTACTAACCC CGCATCTGAC TACAGTTCGG ATCAGAGTCT TATGCAACCA AGCGACAAGA CATGGGTATA TGTTGGTGAC CATCGCATAT TTGCTATCTA TCAAGAGTCA GAAATCACTG TGATTGATCG TCACGGCAAG TATCGTATTT ACGACAGTGA GTACCATAAG CGCTTGAAGA AGAAATTAAG CGCCCCAGAG CTTGTTGAAG TGATGCGTGA AGGACGTAGA CTCTATAACC ATTAA
|
Protein sequence | MVERQKQIGR DRVSRLVSWG HWFAFINGLL AIIVGYRYLD TIGLPESFIG WGYLVISTIG HFSFLAFMVY LVFIFPITLL LPYSRILRGY AATVATLSLC LLLYDTVIYD DYGLHLSPFV FDLAWADLNA LLRGTSYIIT PLAILVIELT LANFLWKRVE KIRKRNVGNK VVVLVGICFV ASHLIHIWGD AADVTEITHF DDAYPLSYPA TAKSLMESYG IEGSRDHRSQ TPPKASLQYP LSPMQCTADS LPNILVIAVD SLRADLVDES TMPFLSSYAQ QNMNFTKHLS GGNQFNSGMF SLLYALQGSY SNAVDLHYQS PVLTQELAAK GYDLGLFTTQ DTLPAPLAIF DDFERVDAEH INSYAISDLQ SIANWQQWTG SASQPWFSLL NLKSPDSYDT PIGFLGIKTV QSSSKLKPAQ KVLFNQYRQS LNFIDKQIES VVNNLPKGTM VVITGVNGKM FTSNSDEERV NLSPDSVRVP MIIHWPNEES AKQIKYRTTH NGLVPAILTQ TLGCTNPASD YSSDQSLMQP SDKTWVYVGD HRIFAIYQES EITVIDRHGK YRIYDSEYHK RLKKKLSAPE LVEVMREGRR LYNH
|
| |