| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1761 |
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| Symbol | |
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| ID | 5662156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2140310 |
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| End bp | 2142472 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236350 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001501619 |
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| Protein GI | 157961585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAGAA TAGAAAAGAA TAAACTCCTG TTAGCCTCAG TGTTAGGCTT AATTGGTTTA
CTGGTAAACC TTTATCCTAT ACACCTATTT GCTAACATAC AGCTGATCCT CGGCAACGTT
TCCTACGTTA TTGCCGCTGT ATTGCTTGGC CCTTGGTATG CACTCTATAC TGCTATGATT
ACCGTTACGG GCCTAATGGT CGCCTGGGAC AGCCCGCATG TTTACTTCTT ATTCGGCGTA
GAAGCCCTCT TCTTAGGTTT AGCCAGAAAA AAAGATATTT ACGCGTTATA CGCAAGCTTT
GGTTTTTGGC TGTTTATCGG TATGCCACTT TTTTATCTTT ATATCTTTCT ATTTACCGAT
CTCCCCAGCA GTCACATCGC CTTTATCATC CTAAAGCAAG GGATTAATGG TTTGGTCTAT
GCCTGCATAG GCTCGCTGAT GATTACCTTA ACGCCCTCTT TTTGGCACTT CAAAAGTAAG
ATAAAAGACC GACAGAGACG TACTTTCAAT GGCCAGCTGA CTTACACTTT TACATTAGTG
ATAACCGTCG CCCTGCTTTT GGCAGCATTA TTGTTCAATA ATCAATTTAT CGAACGCCAA
CAGGCCTTGC TCTATCACAA TATAGAAAGC TCAGCAGCGC ATTTAGGGCT CTCGACTCAA
GCCTATATTG ACTCACACAC CCAAGCGATT AAGAACGCTG CAGCATGGCT CAGCTTAAAT
CAGCACTCTG AGACAGAAGA GCAAATTTTA TTGTCTCATT TACATGAAAA TTATCCTGGG
TTTATCACCA TGCTCCTTGC CGATAGCCAA GGTGTTGTCA TAGGCGCAAG TCCAGCGTCG
TTACTTTCAA GCCTCGAGTC ACAAAGGAAA GAACTCTCAA TCCGTGATAG GGATTACTTT
GTACAAGCCT TTATTAACCA GCGTAACTTT ATCTCTCCAG CATTTCTTGG CAAAGGCTTT
GGCCAAGATC CGATTGTCGC AATAAGTGCT CCCATTTACC GAGCAGATAC GCCCCACCAG
CCAATAGGGA TCATTGAAGG CTCGTTAGAT TTAAAAGAGT TCAAGGTGAT AGATAACATC
AAAACCAATC AGAATAATCA GTCCATTGTG CTTATAGATA AAAATGGCAG AGTCATATAC
GCCACTGACA ACCTTGGTAT TACTCCACTA TCTGAGTTTA ATTACTCGCT ACCCAGTAAA
AATTATATAA CGCCCTTTCC AATGCTCAAT ATTTCCCATA GCGATACGAT GGCGCCAGAG
TACGTCTATG CAAGCGTGAC ATTAGAAAAT GATTGGCAAC TATTTGTACT CAATCCTTTT
CGGCCTCTAG TTGATTTGGT TGAAAGTATG TACCTAGCAA CATTTGCCAT TCTATTTGTC
GCATTGTCTG TCACCATCTA TATCTCACGT GTTATTAGCC GCCGCCTCAC ACTGCCGCTT
GAGAATATCG CCAACAAATT CAGCACTCAA TCAGATAATA ACTATGTGAA TTATGCCGTA
GATGAAGAGT CACCGGAGGA AATTTACACC CTCTTTCAGC GCCTAAAGCA AAGTAAAAGC
CAGCTTATTG GTTATCAGTT GGAGCTTGAA GAGAAAGTCG CCGTGCGGAC CTTGGAGCTT
GAGCACGCTA ACAGTCAATT AAAAGCTCTG GCAGAAAAAG ACCCTCTTAC AGGGTTATAT
AATCGCCGTT ATGCCGAAGA TAAGTTTCCT GGAATTCAGC AGCTATGTAA AAGAAGCGAT
GAGATTATTG CAATTGCGCT GCTGGATCTT GATAAGTTCA AGTTCATTAA TGATACCTAC
GGTCATGATG GCGGCGATCT CACTCTTAAG CGAGTCGCCG AGCTTCTAAG CCAAGAGTTT
AAGCGCGATT CAGACATCAT AGTACGATAT GGCGGCGAAG AGTTTTTACT CATCATGCCG
CTGTGTAATG CCTTAAAAAT TGAGAATCAT TTGGAAAGCT TTAGAAAAAA ACTCGATAAT
ATTGTCATCG AAAGTCAGCA GGATAAGCAG CAATTTAAGG TGACGACCAG CATAGGGGCT
GTGATTGGCA ACGGGACTTA TAGCGACTCA CTGGAACAGT GGGTTAAACA AGCCGATATT
AATCTATATC AAGCCAAAAA GGCTGGGCGA AATAAACTGG TGTTCACGAC CTTAGAAGGT
TAA
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| Protein sequence | MERIEKNKLL LASVLGLIGL LVNLYPIHLF ANIQLILGNV SYVIAAVLLG PWYALYTAMI
TVTGLMVAWD SPHVYFLFGV EALFLGLARK KDIYALYASF GFWLFIGMPL FYLYIFLFTD
LPSSHIAFII LKQGINGLVY ACIGSLMITL TPSFWHFKSK IKDRQRRTFN GQLTYTFTLV
ITVALLLAAL LFNNQFIERQ QALLYHNIES SAAHLGLSTQ AYIDSHTQAI KNAAAWLSLN
QHSETEEQIL LSHLHENYPG FITMLLADSQ GVVIGASPAS LLSSLESQRK ELSIRDRDYF
VQAFINQRNF ISPAFLGKGF GQDPIVAISA PIYRADTPHQ PIGIIEGSLD LKEFKVIDNI
KTNQNNQSIV LIDKNGRVIY ATDNLGITPL SEFNYSLPSK NYITPFPMLN ISHSDTMAPE
YVYASVTLEN DWQLFVLNPF RPLVDLVESM YLATFAILFV ALSVTIYISR VISRRLTLPL
ENIANKFSTQ SDNNYVNYAV DEESPEEIYT LFQRLKQSKS QLIGYQLELE EKVAVRTLEL
EHANSQLKAL AEKDPLTGLY NRRYAEDKFP GIQQLCKRSD EIIAIALLDL DKFKFINDTY
GHDGGDLTLK RVAELLSQEF KRDSDIIVRY GGEEFLLIMP LCNALKIENH LESFRKKLDN
IVIESQQDKQ QFKVTTSIGA VIGNGTYSDS LEQWVKQADI NLYQAKKAGR NKLVFTTLEG
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