Gene Spea_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1757 
Symbol 
ID5662152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2136378 
End bp2137022 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID641236346 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001501615 
Protein GI157961581 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.290271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC AATTACTTAT ATCACTGTCC ATGATACACC TTATTGCTCT AGCCAGCCCT 
GGGCCAGATT TTGCTTTAGT GGTTCGCCTC GCGACTCAAG AGTCTCGCGT GGCAGCCGTT 
GCCTCAGCAT TTGGCATAGC AGTAGCGATT CTTGGGCACA CCCTGCTTAG TTTAACTGGG 
GTTAGTCTTA TCATTCAAAG CTCAGATGTT TTATTCACCA TCGTTCAGTT AGCTGGTGCC 
AGTTATTTAG CCTTGATGGG CGTTGGCGCA ATAAAATCGG CATGGCTACA CTGGCAAGAT 
CCAGTATCGA TTGAGACATG TGTACAAGGG GAAGGAGTAA CCGCTTATAA AGGCTTTATG 
CAGGGGCTCT ATACCAATAT TTTGAATCCC AAAGCCTTAG TGTTTTTTAT CACCCTATTT 
TCAACCCTTA TTACACCTCA GGTTAGCTTT TCCACCAAGA GCATGGCGGC TTTCTTGCTG 
TTTTCCTTAT CCTTTATCTG GTTCAGTTTT ATTGCAATAG TGCTGTCGAA GCCCAGAGTT 
CAGCTTAAAA TGAAAAAGGT CAGTCCGCTA ATTAATCTCG TCACTGGGTT GGTGTTTATA 
GGGGTGGCCC TGATGATTAT CTCTGGCCTC GTGACATCGC ACTAA
 
Protein sequence
MEFQLLISLS MIHLIALASP GPDFALVVRL ATQESRVAAV ASAFGIAVAI LGHTLLSLTG 
VSLIIQSSDV LFTIVQLAGA SYLALMGVGA IKSAWLHWQD PVSIETCVQG EGVTAYKGFM 
QGLYTNILNP KALVFFITLF STLITPQVSF STKSMAAFLL FSLSFIWFSF IAIVLSKPRV 
QLKMKKVSPL INLVTGLVFI GVALMIISGL VTSH