Gene Spea_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1752 
Symbol 
ID5662147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2129463 
End bp2131217 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content44% 
IMG OID641236341 
Productpoly(R)-hydroxyalkanoic acid synthase, class I 
Protein accessionYP_001501610 
Protein GI157961576 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.995391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA AATCGCCCTT TCAAGACGCG ATCGACAATG CAATGCAATT TGGCCAAGCA 
TGGATGGATA GCTTCGGGCA GTCGGCTCAA TCCTCTATCG TAGAAACACA AGCGGAAGAT
TGGGCACAAT GGATGCGCTC ATCGGTTGAA CACCCTGTTA ACTCTATTGA ACAACAAATG
GATTGGTGGG GGCAACAAGT CAATCTATTT AACGATTGCA TTATGAGCAG TCCCGCAGAA
AAAGAGACAG ATCGACGATT TAAAGACCCT GCGTGGAATG AACAGGCACT TTATAAATAC
ATCAAAGAAA GTTATAAGTT GGCTTGTAAT AATATTCAAG CATCAATCAA TAACACCGAA
GGGCTAGATG ACGAAACTCG TCAGCGATTA TCCTTTTTTT CTCGCCAGTA TCTTAATGCT
ATGTCACCGA GCAATTTTGT TGCCACCAAC CCTGAAATAA TGAAGCTAAC CATTGAGAGT
AAAGGCCAAA ACCTAATTAA AGGGCTAGAG CAACTTCAGC AAGATTTAGA GCAAAGCGTC
GATACCTTGA ATATTCGCAT GACAGATAAA ACGGCTTTCA CTGTAGGAAA AAATATTGCC
ACAACTCCTG GTAAGGTTGT CTTTAAAAAC GATCTGTTTG AACTTATTCA ATATCAAGCC
ACAACGGAGC AAGTGTACAA ACGACCTCTG CTTGTTGTAC CGCCATTTGT GAACAAATTT
TATATCATGG ATCTAAGCCC TGAGCGTTCT TACACGCAAT GGCTAGTGAG CCAAGGGCAT
ACAGTATTTA TGATCTCTTG GGTTAACCCC AATGCCGAGA TGGCAGCAAC TGATTTTGGT
GACTACGTTA CTCAGGGGGT TATCCTTGCG TTAGATGCAA TAGAAGCTGA AACCGGTGAA
CGTGAAGTCA ACGGTATTGG TTATTGTATC GGTGGGACAC TGTTAACTGC AGCAATGGCT
TATTTAGCCG GCAAACGCCG CAAGCAAAGA GTCAAATCAG CAACCTTACT CACCACCATT
CTAGACTTTG GCCAACCTGG CGAACTTGGT GTGTTCATCA ACGACCCACT GATTAGCAGT
ATCGAAGCGC AGAATAATGC TCGTGGCTAC ATGGATGGAC GACAGATGGC TGTGTCATTT
AGCCTGTTAA GGGAAAATAG CCTGTATTGG AATTACTATG TGACCAACTA CCTTAAAGGC
GAAAGTCCAG TGGCGTTCGA TCTACTTCAT TGGAATTGTG ACAATACCAA CATAACTGCT
GCGACACACA ATCAGATATT ACGCCAAATG TACCTTGAAA ATAAGCTGAA GGAACCTGGT
GGCATCACAG TTGATGGCGT TAAAGTCGAC CTGAGTAAAG TTAAGTCTCC GTGCTATTTC
CTCTCCGCTA TTGAAGATCA TATTGCAGTC TGGGAAGGCA CTTTTCGTGG TACAGAGTTA
CTCAATGGCG ATAACACCTT TGTGCTGGCC GAAAGTGGCC ATATTGCAGG ACCCATGAAC
CCGCCAAGTT CTAATAAATA TGGTTTTTGG ACCAATAGCG ATAATGCGCA GAGCCCGGCG
AAATGGCTGG CTGAGGCGGA TAATCATTCT GGTTCTTGGT GGCCCCACTG GCAATCTTGG
GTCGATGAAC GAAATTTCTC TGACAAAATA GCAGCACGTT CATTAACTGG GAAGTTAGAT
GCTCCGGGGG AGTACGTAAA ACAACGAATC GAAGATGTGA TAGCACCAAA AGAGGAGGTA
CGCCATGACA CTTAA
 
Protein sequence
MESKSPFQDA IDNAMQFGQA WMDSFGQSAQ SSIVETQAED WAQWMRSSVE HPVNSIEQQM 
DWWGQQVNLF NDCIMSSPAE KETDRRFKDP AWNEQALYKY IKESYKLACN NIQASINNTE
GLDDETRQRL SFFSRQYLNA MSPSNFVATN PEIMKLTIES KGQNLIKGLE QLQQDLEQSV
DTLNIRMTDK TAFTVGKNIA TTPGKVVFKN DLFELIQYQA TTEQVYKRPL LVVPPFVNKF
YIMDLSPERS YTQWLVSQGH TVFMISWVNP NAEMAATDFG DYVTQGVILA LDAIEAETGE
REVNGIGYCI GGTLLTAAMA YLAGKRRKQR VKSATLLTTI LDFGQPGELG VFINDPLISS
IEAQNNARGY MDGRQMAVSF SLLRENSLYW NYYVTNYLKG ESPVAFDLLH WNCDNTNITA
ATHNQILRQM YLENKLKEPG GITVDGVKVD LSKVKSPCYF LSAIEDHIAV WEGTFRGTEL
LNGDNTFVLA ESGHIAGPMN PPSSNKYGFW TNSDNAQSPA KWLAEADNHS GSWWPHWQSW
VDERNFSDKI AARSLTGKLD APGEYVKQRI EDVIAPKEEV RHDT