Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1746 |
Symbol | |
ID | 5662141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2123470 |
End bp | 2124144 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236335 |
Product | two component transcriptional regulator |
Protein accession | YP_001501604 |
Protein GI | 157961570 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000480188 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATAT TAGTTGTTGA AGATGACCCG ATTCTATCTC ACCACCTAAA AGTGCAACTC AGCGAATTAG GCAATCAAGT TCAAGTTGCG CTAACAGCGA AAGAGGGATT TTATCAAGCC ACTAACTATC CTATCGATGT GGCTATCGTC GACTTAGGCC TTCCAGACCA AGACGGTATA AGCCTAATTC AAAGTCTTCG TGACGAGGGT TTAAAAGCCC CGGTATTGAT CTTAACCGCT CGGGTTAATT GGCAAGATAA GGTAGAAGGA CTGAATGCTG GCGCCGATGA CTACCTAGTT AAACCTTTCC AGAAAGAAGA GTTAGTCGCT CGCTTAGATG CCCTCGTGCG TCGTAGTGCT GGCTTTGTAA AACCCCAAAT CACCAGCGGT GCACTTGAGC TTGATCTTGC AGCCAAGCAA GTCAGCCTCA ACGAGCAACC TATGGAAGTG ACAGCATTTG AATATTTGAT TCTTGAGTAC CTGATGCGAC ACTGCCATGA GGTAGTGGCT AAACAGCGCC TGCTGGATGT GATCTATGGC GATAAGGAAG GTGACCCCAA TACTATCGAA GTCATGGTCA GCCGCCTACG TAAGAAACTC ACCAAAGGCG GTATCGAAAA CCCTATTGTA ACCATTCGAG GCCAAGGGTA TAAATTCAAT CTGCCATGCA ATTAA
|
Protein sequence | MRILVVEDDP ILSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI SLIQSLRDEG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA GFVKPQITSG ALELDLAAKQ VSLNEQPMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG DKEGDPNTIE VMVSRLRKKL TKGGIENPIV TIRGQGYKFN LPCN
|
| |