| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1727 |
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| Symbol | |
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| ID | 5662122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2099532 |
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| End bp | 2100446 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236316 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501585 |
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| Protein GI | 157961551 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.986753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCAACA ATATGGATAA AAGATTCGAT TTCAATTTGT TAGTGATTTT TTTAGAGGTT
TACCAGCTTA GATCTATTAC TCTAGCTGCT GACTCCTTAG GTTTAACTCA GCCGGGCGTC
AGTGCGGCAT TAAAACGCCT ACAAGCTACA CTCGGAGTAG AGCTTTTTGT TCGTGAAGGT
CGTGGTATTT CACCAACCAA CGCGGCGATT CAGCTAGCGA GTCAAGTCTC ACCGGCCTAC
AACACGGTTA ACAGTGCACT GAGCAATGTG GCAGGTTTTG ACAAGCAGAC ACCGCGCTCG
TTTCTAGTCT ATGTCGATGA ACCTATGATG AATCTGCTGC AACCTTTAGC TGAACAAGAT
AGCGATATGG GCAACTGTGA GATTATGTTT CAACTGCCCC CGATTGAAGA GGAACGACTG
CTACAGCAGT TGAGTTTGCA AAAGGCTGAC TTAGCGATAG ACGTTGGACA GTTGCCTAGC
CTTTCTTACT CTAATCAACT TTTTTACCGT GAAAGCGTCA CCATGATTTG CCGTAAGGGT
CATCCGCGTA TTAATGGCAA GATAGGCAAA ATTCAGTTTT ACCAAGAGAA ACATATTACT
TTGCAGATCC GCCGCGCGAC GCTAACTGCA CTGGATTTTT TCACCGAGGA AGTGATCGGT
GAACGTAAGG TTAGCTGTGA GTGTCACTCA TTACTCTCTA TGATGGCGCT GGTTTCTGAA
AGTGATTGTA TTGCTATCAC CTCAAGGAGT ATCGCTGATA AGTATGCAGA TAAATTTGGT
CTTCAAAGTA TCGAGCCGCC CTTTAACACT AAGCCTGTGC TACATAATAT GATGTGGCAC
AAACGTAATG AGTTTAACCC TGCACATACT TGGCTTAGGG AAAAGCTAAA CCAATTGGTG
AAGCAATGGA ATTAG
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| Protein sequence | MGNNMDKRFD FNLLVIFLEV YQLRSITLAA DSLGLTQPGV SAALKRLQAT LGVELFVREG
RGISPTNAAI QLASQVSPAY NTVNSALSNV AGFDKQTPRS FLVYVDEPMM NLLQPLAEQD
SDMGNCEIMF QLPPIEEERL LQQLSLQKAD LAIDVGQLPS LSYSNQLFYR ESVTMICRKG
HPRINGKIGK IQFYQEKHIT LQIRRATLTA LDFFTEEVIG ERKVSCECHS LLSMMALVSE
SDCIAITSRS IADKYADKFG LQSIEPPFNT KPVLHNMMWH KRNEFNPAHT WLREKLNQLV
KQWN
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