Gene Spea_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1720 
Symbol 
ID5662115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2091983 
End bp2092657 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID641236309 
Producthypothetical protein 
Protein accessionYP_001501578 
Protein GI157961544 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.851625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT ATGGTCTTGT CTTAAGTAGT GCCTTGAGTA GTGCTCTTCT ATTGGTTACC 
ACATCGGCGT TAGCTGAAGT CACCCTCACA ATGCCTTCAA ACTCAGAACT CGTACTAGTA 
AACGGGGTCG ATGCTAACGG ACGTGAAAAA CTAAGCCTGA ATAATGGTCT CAACCAGATT 
GCATTTAGAT ATCTTGGGCG TTACCAACAG CAAGGCTCTC AAAACCAGTT CCAATCAGAT 
GTAATTGTCA TCAAGTTCGA TGAAAGTGAT GCTCAACTCT ATCTATCTAT GCCACGAGTT 
CGCTCCAACA GCGCAGCTAA CAAGTTTAAT CAGTCCCCAG AAGTGACACT GGAAGACCAA 
AACAGCAATG CGGTAGCCTT TGAATTGGGG ATGCTGATAA AAAAAGGTCT GCAACTAGGT 
CGAGACTATG AAGTTGAGAT GGCAGCCTAT AACGTTACAG ATCAAAAAGC GTCGCTAAAC 
ATTAAGCCAG CAACAATTTC AACGCCGCAA ACAGCTATTC CTGTTGCCAC TGCAGTGAGT 
GTGAGTGCAG CAACAGCGAC TAAACAAAGT AAAAAAAGCG AGCAGATAAA TGTTGGCCAG 
ATGCTCGATT TCTGGTACCA ACAGGCCGAT GAAGAAACGC GAAAAGCCTT TAAAAAGCGA 
ATTGAAGACA AGTAA
 
Protein sequence
MKRYGLVLSS ALSSALLLVT TSALAEVTLT MPSNSELVLV NGVDANGREK LSLNNGLNQI 
AFRYLGRYQQ QGSQNQFQSD VIVIKFDESD AQLYLSMPRV RSNSAANKFN QSPEVTLEDQ 
NSNAVAFELG MLIKKGLQLG RDYEVEMAAY NVTDQKASLN IKPATISTPQ TAIPVATAVS 
VSAATATKQS KKSEQINVGQ MLDFWYQQAD EETRKAFKKR IEDK