| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1710 |
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| Symbol | |
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| ID | 5662106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2076957 |
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| End bp | 2078213 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236297 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001501569 |
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| Protein GI | 157961535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000301061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTC ACAAATCTCA ACTGAGAACA CCCCGCTCCT CTTCTGCCAC TGATAGCCCA
TTGGCGCGAA AGATAGGCCT GCCCCTGCTG ACACTTTATG GCTTAGGTAC CATGCTCGGC
GCAGGGGTTT ACGTATTAGT CGGAAAAGTA GCAGCCAATG CAGGTATGCT CGCCCCGCTC
TCCTTTATTG TTGCCGCTAT CATTGCCTAT GTTACTGCGC TCAGTTACTG TGAGCTAGTA
TCTCGCTTTC CTCAAAGCGC TGGTGAAGCC TGTTATGTTG AGCAGGGCTT TCACCGCCGT
TATTACGGCA TCATTGTTGG TTACCTTGTG GTGTTTACTG GCATAGTCTC ATCCGCAACA
CTCATAAATG GTTTTGTCGG CTACTTAGCC CATTTTGTCG AGATCCCTCG CCATGTCAGC
ATTTCAGTTA TGCTGCTATT ACTCGGACTC ATTGCGATAT GGGGTATTGC TGAATCACTC
TGGCTCACAG CGTTGTTAAC TGTCATTGAA GTATTCGGGC TTTTGCTGGT CATTACAATT
GCAGGCAGCG CGCTTCCGGC CTCCATAGAT ATACAGCAAG CTTTTATTCC AGAAAGCTCA
CTCGTTTTAG GAGGTGTCCT CAGCGGCGCT TTTCTCGCTT TTTATGCCTT TATCGGCTTT
GAAGATATGG TCAACATTGT TGAAGAGGTT AAGTCTCCAA GCAAAACCAT GCCAAGGGGA
ATAATACTGG CATTCATTAG TGCTAGCTTA CTCTATGTCA TTGTTGCACT AGTCGCAGTC
TTCTCTCTTC CCTTAGATCA ACTTGCGGCC TCAGATGCTC CACTTAAAGA TATCCTGCTC
CCCCACCATC CCATGGCGGG TACCTTAATC GGCATCATCA GTCTATTTGC AATTCTAAAC
GGCATACTCG TTCAGATAAT CATGGCAGCT CGTGTTCTTT ACGGTATGGC TCGCCAAGGA
CGCTCACCCG CTTTTTTCGC TAAGGTGAAC AGCAAAACCC AAACTCCAAT CAACGCCACC
ATTATCATTA CCGCAATAGT GTGCTTTTTC GCACTTTGGC TTCCCCTAGT CACACTGGCC
AAAACCACCA GCTTTATTAT TCTAATTATT TTCGCTTTAG TTAATCTGTC ACTTTGGCGT
GTTCAGCGCC AAACCGCTAC AGACAAGACG ATTAACCGAC GAGGCTGGCC TATTACTGGT
ACTTTGTTGT GCCTTTTTCT ATTATCCGTT CAGATTGTTA GCTATGTTTT CACATAA
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| Protein sequence | MQAHKSQLRT PRSSSATDSP LARKIGLPLL TLYGLGTMLG AGVYVLVGKV AANAGMLAPL
SFIVAAIIAY VTALSYCELV SRFPQSAGEA CYVEQGFHRR YYGIIVGYLV VFTGIVSSAT
LINGFVGYLA HFVEIPRHVS ISVMLLLLGL IAIWGIAESL WLTALLTVIE VFGLLLVITI
AGSALPASID IQQAFIPESS LVLGGVLSGA FLAFYAFIGF EDMVNIVEEV KSPSKTMPRG
IILAFISASL LYVIVALVAV FSLPLDQLAA SDAPLKDILL PHHPMAGTLI GIISLFAILN
GILVQIIMAA RVLYGMARQG RSPAFFAKVN SKTQTPINAT IIITAIVCFF ALWLPLVTLA
KTTSFIILII FALVNLSLWR VQRQTATDKT INRRGWPITG TLLCLFLLSV QIVSYVFT
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