Gene Spea_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1701 
Symbol 
ID5662097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2067203 
End bp2067874 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID641236288 
ProductGntR family transcriptional regulator 
Protein accessionYP_001501560 
Protein GI157961526 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0631333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAA CAACACCTAT CGTCCATAAA ACTCGCACAC AAATTGTGGT TGTGGTGCTT 
AGGGAAAAAA TCCTTTCCGG TGAAATTGCG GCGGGAAAAC CGTTACGTCA AAGCGCCTTA 
GCTGATGAAC TAAATGTTAG CCGAATTCCG GTAAGAGAAG CCTTATTGCA ACTGGAAGCC 
GAAGGCTTAG TGAAATTTGA AGCCCATAAA GGCGCAACAG CAACACTCTT GTCTGTTGAG 
CATGTTACCG AACTTTTTGA ATTACGAGCA CTGATCGAAG GCGACTTGCT CGCGAAGTCG 
ATACCTAACT TAAGTGAAGA AGATCTCAAT CAAGCCGAGA GTATTCTGCA AGAAATGGAT 
GCAGCTTTCC AAGATAAAGA TCAAGTTGAA AACTGGAGTG GGTTAAACTC ACAATTCCAT 
ACTTGCCTTT ACAGTGCGGC GAATCGTCCC CACACGCTTG AAGTTGTTCA AGGATTAAAT 
ACGAGTTGTG ACCGTTACGT TCGATTACAA CTATTTCTTG CAAGCGGTGT ACCTAAGGCT 
CAACAAGATC ACCGTGAAAT ACTTGAATAT TGTAAGAAGA AAGATGTTGA AAAAGCTGTC 
GAGATATTAC GCGCACATAT CATACACGCT GCCGAAGCGA TCCGCGTATT AGTTAGCCAA 
CAAGACGACT AA
 
Protein sequence
MSRTTPIVHK TRTQIVVVVL REKILSGEIA AGKPLRQSAL ADELNVSRIP VREALLQLEA 
EGLVKFEAHK GATATLLSVE HVTELFELRA LIEGDLLAKS IPNLSEEDLN QAESILQEMD 
AAFQDKDQVE NWSGLNSQFH TCLYSAANRP HTLEVVQGLN TSCDRYVRLQ LFLASGVPKA 
QQDHREILEY CKKKDVEKAV EILRAHIIHA AEAIRVLVSQ QDD