Gene Spea_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1700 
Symbol 
ID5662096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2066038 
End bp2067102 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID641236287 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001501559 
Protein GI157961525 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.881094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CCACTATTAC TGGTTGGGGA AAGTGTGTTC CGCCTGCCAC CCTAACAAAC 
CATGATCTTG CCACTTTTAT TGAAACCTCA GACGAGTGGA TCAAACCGCG CACAGGCATT 
AGCCAAAGAC ACATTAGCCA CGTTGATACG TCGGCTTTGG CCTCTGTTGC CGCCAAACGA 
GCACTCGCAG CAGCGGGGAT CGATGGTAGT GAACTAGATA TGATTATTCT TGCCACGGCG 
ACCCCAGATA CCCTGATCCC GAATATTGCT TCTACCGTAC AGGCTGAAGT GGGTGCAACC 
TGTGCAGCTT TTGATATCAA CGCCGCCTGT AGTGGCTTTT TATATGGCCT AGGCTTAGGT 
AGTTCACAGA TCAAGAGCGG TCAGTGTAAG AAAGTACTTG TGATCGGTGC CGAGCGTCTT 
TCATTTTTCT TAGACTGGTC TCGTCGCGAC ACTGCCGTAC TTTTCGGTGA TGGCGCTGGC 
GCTGTCGTGC TAGAAGCAAC TGACGAAGCG ATTGGTGTAT TGGGTTATGA GCTAAATAAC 
GACCCAGATG GCCGTGATAT CCTTAAAGCT GGATTTGGTA CGGCTATGGA TAGATTTGAA 
GCTTCATCTT TAGATTTCTA CATAGAATTT AACGGTCAAG AGATCTTTAA ACGCGCTATC 
GCAGGCATGG GTAAGTTAAG CGCTAAAGTT ATCGAAAAGT GCGGTATCGA TAAAGAAGAG 
ATCGATTGGG TTATTCCTCA TCAGGCGAAC GAGCGTATTA TCGATACGTT AATTAGCCGC 
ATGAAGATCC CGAAAGAGAA AGCGGTTGTG AACATAGCCA ACTACGGTAA CACCTCTGCA 
GCGACCATTC CGATTGCAAT CTGTGACGCC CTAGAGCAAG GTAAAATTCA ACCTAACCAA 
ACTATTCTAT CTTGTGCATT TGGTGCAGGT CTAACGTCTG CTGCGGCATT GATTAAATGG 
GGTGACAGAG TCACACCAAT TAATACTAGC GATGCAGAGC TACCTCCTTG TGATAAAACA 
GGTATTGAGC TCGTCGCGAA AGCGGTTAAG CATTTCTGCG GCTAA
 
Protein sequence
MQYATITGWG KCVPPATLTN HDLATFIETS DEWIKPRTGI SQRHISHVDT SALASVAAKR 
ALAAAGIDGS ELDMIILATA TPDTLIPNIA STVQAEVGAT CAAFDINAAC SGFLYGLGLG 
SSQIKSGQCK KVLVIGAERL SFFLDWSRRD TAVLFGDGAG AVVLEATDEA IGVLGYELNN 
DPDGRDILKA GFGTAMDRFE ASSLDFYIEF NGQEIFKRAI AGMGKLSAKV IEKCGIDKEE 
IDWVIPHQAN ERIIDTLISR MKIPKEKAVV NIANYGNTSA ATIPIAICDA LEQGKIQPNQ 
TILSCAFGAG LTSAAALIKW GDRVTPINTS DAELPPCDKT GIELVAKAVK HFCG