| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1696 |
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| Symbol | |
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| ID | 5662092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2060337 |
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| End bp | 2062055 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236283 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001501555 |
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| Protein GI | 157961521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAC AAACACTAAC ATATCTGATT GTCGGGTTTA CATTTGCCCT ATATATCGGA
ATCGCGATCT GGTCTAGAGC CGGATCAACT AAAGAATTTT ATGTTGCAGG TGGTGGTGTT
CACCCTGTAA TGAACGGCAT GGCAACGGCA GCTGATTGGA TGTCTGCTGC GTCATTTATC
TCGCTAGCAG GTATTGTTTC TTTCGTCGGT TACGACGGCT CTGTTTACTT AATGGGTTGG
ACGGGAGGCT ATGTACTATT AGCCCTCTGT ATGGCCCCAT ATCTACGTAA GTTTGGTAAG
TTTACCGTAC CTGACTTTAT CGGTGATCGT TATTACTCTC AGGCTGCACG TACTGTAGCA
GTCGTATGTG CCATCTTTAT CTGCTTTACT TATATCGCAG GTCAGATGCG TGGTGTGGGC
GTAGTATTCT CAAGATTCCT CGAGGTCGAT GTTGATACCG GTGTTTATAT CGGTATGGCG
GTTGTATTCT TCTACGCTGT TTTAGGCGGC ATGAAAGGGA TTACTTATAC ACAGGTTGCG
CAGTACTGTG TACTTATTTT CGCATTCATG GTACCAGCAA TCTTCATCTC AGTGATGATG
ACGGGTCATA TCATTCCACA AATTGGTTTT GGTGCAGAGC TAATTGATGC AGCGGGTAAT
GGTACGGGGG AATATCTGTT AGATAAACTC GATGGATTGT CGACAGATCT CGGTTTCTCG
CAGTATACCG AAGGCTCTAA GAGCATGATT GATGTGTTCT TTATTACGGG GGCTTTGATG
TTCGGTACAG CGGGTCTACC ACACGTTATC GTACGCTTCT TCACTGTACC TAAAGTGAAA
GATGCTCGTG TATCAGCAGG TTGGGCGCTA GTGTTTATTG CTATTATGTA CACTACAATT
CCAGCGCTTT CAGCTTTCTC TCGTGTAAAT ATGATTGAAA CCATTAATGG TCCAGAGTCT
ACAGGTGTCG CTTATGAAAC TGCACCAGAT TGGATTAAGA ACTGGGAGAA GACAGGTCTA
ATTACTTGGG ATGATAAGAA CGAAGACGGC AAGATTTATT ACGCAAAGGG CCCTGAAAGC
GAGATGAAGA TTGACCGCGA TATCATGGTT CTTGCAACTC CAGAAATTGC TAACCTTCCT
GCATGGGTGA TTGCATTGGT CGCTGCTGGT GGTCTTGCTG CTGCGTTATC AACTTCAGCA
GGTCTATTAC TGGTGATTTC AACTTCGGTA TCTCATGACC TATTGAAGAA AAACTTTATG
CCTGATATCT CCGATAAGAA GGAGCTAATG TATGCCCGTA TTGCTGCTGC GGCTGGTATT
GTGATGGCAG GTTACTTCGG GATTAATCCT CCAGGCTTTG TTGCGGCGGT AGTTGCGATT
GCATTCGGTT TAGCTGCGTC GTCACTGTTC CCTGCAATTA TCATGGGTAT TTTCTCTAAG
ACTGTGAATA AAGAAGGTGC TATCTCAGGC ATGATTTCTG GTCTGCTATT TACTGCGTCT
TACATCGTTT ACTTCAAGTT TGTAAATCCA AGTGCTAACA CGGCTGATAA CTGGTTATTT
GGCATTTCAC CTGAAGGTAT CGGTCTAATG GGGATGGTGA TTAACTTTGC TGTGGCATTT
GCTGTAAGTA AAGTGACTGC AGCTGTACCA CAAGACGTTG TTGATATGGT TGAGTCAATC
CGTTTCCCTA AAGGGTCGGG TGAGGCGCAA GATCATTAA
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| Protein sequence | MDVQTLTYLI VGFTFALYIG IAIWSRAGST KEFYVAGGGV HPVMNGMATA ADWMSAASFI
SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFIGDR YYSQAARTVA
VVCAIFICFT YIAGQMRGVG VVFSRFLEVD VDTGVYIGMA VVFFYAVLGG MKGITYTQVA
QYCVLIFAFM VPAIFISVMM TGHIIPQIGF GAELIDAAGN GTGEYLLDKL DGLSTDLGFS
QYTEGSKSMI DVFFITGALM FGTAGLPHVI VRFFTVPKVK DARVSAGWAL VFIAIMYTTI
PALSAFSRVN MIETINGPES TGVAYETAPD WIKNWEKTGL ITWDDKNEDG KIYYAKGPES
EMKIDRDIMV LATPEIANLP AWVIALVAAG GLAAALSTSA GLLLVISTSV SHDLLKKNFM
PDISDKKELM YARIAAAAGI VMAGYFGINP PGFVAAVVAI AFGLAASSLF PAIIMGIFSK
TVNKEGAISG MISGLLFTAS YIVYFKFVNP SANTADNWLF GISPEGIGLM GMVINFAVAF
AVSKVTAAVP QDVVDMVESI RFPKGSGEAQ DH
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