Gene Spea_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1680 
Symbol 
ID5662076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2038383 
End bp2039456 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content44% 
IMG OID641236267 
ProductO-methyltransferase, putative 
Protein accessionYP_001501539 
Protein GI157961505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.275559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTT ATCGCTCTCC CCTCTCGATC AGTGCATTTG ACGCAAAATT TGAAGCACAA 
AAAATCGCTT TTGCTCCCAT AAGTTTTCAG GTTGCACGCT GCTTATTAAA ATTTAACTTA
CTGCAGTTTA TCTCTGACAG CGGTAACGCC GGCAGTAGCC TTAGCCAATT AGCCCAGCAA
TCAAAGCTAT CTGAATATGC CGTAGGAGTA CTTGTGGATA TGGGCCTAAG TATGGGGCTA
CTGTATCTCA ATGATGACAA ATACGTGCTC GATAAGATTG GCCACTTTCT GCTACATGAT
GATATGGCAA AGACCAACCT TAACTTCACT CATGATGTCT GTTATCAGGG CCTATTTGAG
TTAGAGGCAT CGCTTATTGA AGGCAAACCA AAAGGATTAG CTAGCCTAGG CGATTGGCAA
ACCATCTACC CTGGATTGAG CCAATTACCC GATGAAATAA AAAAGAGCTG GTTTGAATTC
GATCACTACT ACTCAGATCA TGCATTTGAG TCTTTGTTGC CACTTATCTT TCAATCTAAG
CCTAAACAAA TTGTCGATGT AGGTGGCAAT ACCGGTAAAT GGGCTCTCGC CTGCACAGGC
TTTGACAGTC AGGTTCAAGT GACCATCATG GACCTGCCAG GACAACTGCA TGTTGCTATG
GAAAATGCTC AAAAAGCTGG AGTCTCTGAG AGAATTAAAC CTTTCGTTAC CGATCTACTC
GATGAAACTA AGGCATTTTG TGAAAATGGT GATCTCTACT GGATGAGTCA GTTCTTAGAC
TGCTTCTCAG AGTCTGAAAT CCTCAGCATT TTAAAACGCG CCGCATCGGT TATGACATCT
AGCAGTGAGC TTTGTATCTT AGAAACGTTT TGGGATCGTC AACCCTTTGA AGCTGGCGCC
TATTGCGTCA ACGCGACCTC GCTATATTTT ACTGCTATCG CCAATGGCAA CAGCCGCATG
TATCACAGTA AAACCTTGCT CAAGCTGATC AGTCAAGCAG GACTGTTCGT CGATGAAGAT
ATCGACAATA TCGGCCTTGG CCATACCTTG CTACGTTGCA AGCTCAAACC TTGA
 
Protein sequence
MSFYRSPLSI SAFDAKFEAQ KIAFAPISFQ VARCLLKFNL LQFISDSGNA GSSLSQLAQQ 
SKLSEYAVGV LVDMGLSMGL LYLNDDKYVL DKIGHFLLHD DMAKTNLNFT HDVCYQGLFE
LEASLIEGKP KGLASLGDWQ TIYPGLSQLP DEIKKSWFEF DHYYSDHAFE SLLPLIFQSK
PKQIVDVGGN TGKWALACTG FDSQVQVTIM DLPGQLHVAM ENAQKAGVSE RIKPFVTDLL
DETKAFCENG DLYWMSQFLD CFSESEILSI LKRAASVMTS SSELCILETF WDRQPFEAGA
YCVNATSLYF TAIANGNSRM YHSKTLLKLI SQAGLFVDED IDNIGLGHTL LRCKLKP