| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1675 |
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| Symbol | |
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| ID | 5662071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2032478 |
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| End bp | 2033383 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236262 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501534 |
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| Protein GI | 157961500 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTATT CACTCAAGCA AATCACCGTT TTTGACGCCG TAGCGAGCCT AGAAAGTGTC
AGTGCTGCAG CAAGAAAATT ATCGATGACC CAATCGGCAG TCAGTATGTC GCTTGGACAA
TTGGAAAATC TGCTAGGGCG TCCACTGTTT ATCCGCCAAG GAAATCGGCT AACATTAAGC
CATTGGGGAA ACTGGTTACG TCCCAAAGCG AGACGCTTAC TGCAAGAGGC CCAACATATC
GAATTAGGTC TTCATGAACA GCACCTTATT AGCGGTCAAT TCAGGTTGTG CTCAAGCCAA
ACCGCTGCTG AACATTTGAT CCCAGAACTC ATCAGTAGAA TTGATACTGA TTTTCCTGAG
CTAAGAATAG AACTTTCGGT AGAAAACACC GAAAATGTGA TTGAAGGCTT ACTCAACTAT
GAGTTCGATC TCGGGATTAT TGAGGGGAGA AATGACGACT CTAGATTACA TAAAGAGAAG
TGGATTGATG ATCACCTAGT AGTCATTTCA TCACCCAATC ACCCCTATGC CAAACATGCA
AGCGCTAGTT TATCTCAACT AGAGCAAGCA AAATGGGTTT TACGAGAGCA AGGTGCCGGA
ACAAGAAGAA TATTCGAAGG GGCTATTCAC GGTATTATCG AAAAGCTTAA TGTGTGGAAG
GAATACGAAC AGGTTCCGGT CTTAAAGGCT TTAGTTAAAA ATGGACAATA TATTAGCAGC
CTACCCTATC TGGATGTTGA GAAGGAAGTT GCTAGCGGTG AGTTGGTTAT CCTGCCTACC
CCCCAAATTA ACATGCAGCG TCACCTTTCC TTCATCTGGC GGGCAGACTC AGGTGAAAAC
CCTTTACGGG ACTGTCTTAT CACAGAGGCA AAAAGATTGT GCCGTAATCG GCAGATAAAG
AAGTAA
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| Protein sequence | MKYSLKQITV FDAVASLESV SAAARKLSMT QSAVSMSLGQ LENLLGRPLF IRQGNRLTLS
HWGNWLRPKA RRLLQEAQHI ELGLHEQHLI SGQFRLCSSQ TAAEHLIPEL ISRIDTDFPE
LRIELSVENT ENVIEGLLNY EFDLGIIEGR NDDSRLHKEK WIDDHLVVIS SPNHPYAKHA
SASLSQLEQA KWVLREQGAG TRRIFEGAIH GIIEKLNVWK EYEQVPVLKA LVKNGQYISS
LPYLDVEKEV ASGELVILPT PQINMQRHLS FIWRADSGEN PLRDCLITEA KRLCRNRQIK
K
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