| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1674 |
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| Symbol | |
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| ID | 5662070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2030945 |
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| End bp | 2032426 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236261 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_001501533 |
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| Protein GI | 157961499 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2116] Formate/nitrite family of transporters
[COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCTA ATCAAGTGGT TAAAGAACAG GTGCTAGTAA ACCCTTTACA GCAAAGAGCT
GAGAGCCCCA GAGCCGAACT ACTAAGTCTA TACCAACATG CCGAGTATTA TGGCAAGGCA
AAGGTGATTA AATCGGCATG GCAGTCCTTT GGTTTAGCTG CATTTGCTGG TGCTTTTATT
GCCTTGGCGT TTGTTTTTTA TATCACAGTG ACAACGGGAA GTGATGGGTC GTGGGGCTTA
GTGCGTCTAG CGGGGGGACT CGCATTTAGT TTAGGTCTGA TGTTAGTGGT TATCTGTGGC
GGCGAGCTTT TTACCAGTAC CGTTCTGAGT AGCGTTGCCT GGGCTCAAAA GCTTGTTACA
ACACGAGACC TTATTAAATG TTGGGCTCGA GTATACCTAG GTAACCTCAT CGGCGCCGTG
ATCATGTTGA GTTTGATTAT GTCTGCTCGA ATGTACGAAC TCGACGGGGG CCAGTGGGGG
ATCAATGCAC TAAAAATAGC ACAGCATAAG CTGCACCATA GCTGGGGGCA GGCCTTCGCT
CTCGGTGTGT TGTGCAATAT GTTGGTTTGC TTGGGCGTGT GGATGACTTT TTCGAGTCGT
GACGCACTTA CCAAGGCGAT CTTACTTATG CTTCCCGTAG CTATGTTTGT CAGTAGTGGT
TTCGAGCACA GCATTGCGAA CCTGTTTATG GTGCCTCTTG GGATCACCAT CCATCAGTTT
GCCGATCCCG CCTGGTTTGA AGCGCTAAAC ATTAGTCGCG ATACGTTTGC GGATCTGACT
CTTAGCAATT TTATTTTTAG TAATCTTATT CCTGTGACCT TAGGAAATAT CGTCGGTGGT
GGCGTTTTTG TTGGCTTAGG CTACTGGCTT ATCGAAAAGT CAGATCAAAG CGCGAATGCT
TCTTTTACTC ATCGTGTACC AAAACTTGAA ACATCGGCTC AAATACATCA AATACCAACT
TCTGGAGTAC TCATCAAAAT GCCTAAAACA ATAAAAAAAC TATCAGTAAA AGATCTTATG
GATCCAACGC CACTGACTCT CTCTTCTGAG CTGTCTGTCT ATGCTGCGTT GAGCTTACTT
GCAGAAAATG AGTGTCGTAG TGCACCAGTC CTCGACGAAA AAAAGCGTTT GCTTGGTTTT
ATCTCACAGC AAGATCTACT TCGTAGCCTT TGGTCTGAAG AGTTTGCCAG AGGTGTTTCA
TGTAAGGTTA GTGATCTGAT GCAAACGGAG GTGATGACGT TATCGCCACA GGACTCAGTT
GCTGAGCTGA TAGAGTTAAT GGTTGTCGAT AGAAGTAAGT TATTCCCGGT GAACGAGCAG
GGGATCTTAA CAGGGAATAC TTTTAAAAGT TATGAGGAGC GACTACGCAG TGCGTCGCCA
AATAAGCCTA GTGTTTTTCC TGTTTTAGAT AATGGCCTAC TGTGTGGGGT GATCACGCGT
GAGGCGATAG CCAAAAAAGT GTGCGACATT TATAGAGTCT AA
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| Protein sequence | MASNQVVKEQ VLVNPLQQRA ESPRAELLSL YQHAEYYGKA KVIKSAWQSF GLAAFAGAFI
ALAFVFYITV TTGSDGSWGL VRLAGGLAFS LGLMLVVICG GELFTSTVLS SVAWAQKLVT
TRDLIKCWAR VYLGNLIGAV IMLSLIMSAR MYELDGGQWG INALKIAQHK LHHSWGQAFA
LGVLCNMLVC LGVWMTFSSR DALTKAILLM LPVAMFVSSG FEHSIANLFM VPLGITIHQF
ADPAWFEALN ISRDTFADLT LSNFIFSNLI PVTLGNIVGG GVFVGLGYWL IEKSDQSANA
SFTHRVPKLE TSAQIHQIPT SGVLIKMPKT IKKLSVKDLM DPTPLTLSSE LSVYAALSLL
AENECRSAPV LDEKKRLLGF ISQQDLLRSL WSEEFARGVS CKVSDLMQTE VMTLSPQDSV
AELIELMVVD RSKLFPVNEQ GILTGNTFKS YEERLRSASP NKPSVFPVLD NGLLCGVITR
EAIAKKVCDI YRV
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