Gene Spea_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1666 
Symbol 
ID5662062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2018179 
End bp2019090 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content44% 
IMG OID641236253 
Producthypothetical protein 
Protein accessionYP_001501525 
Protein GI157961491 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000201275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAT TTATTGAAGC AGTAAAGCAG GTTGATTTTC CTGAAGACGT GACTCGTTTA 
TTTCATGGGC GAGGAGGGCG TTTTTCTGGC TGTGAACACT TGTGTTTGGA TTGGTATTCA
CCTGTGGTGC TATTGACCAG TTTTAAGGTA TTAGAAAGTG CAGAGCGTGA TGCGTTATGT
GCGGCTATTG AGCAGCGTTG GTTTGAGCTT AGAGGCGATG AGCCGCTCAA TCTGGTTTTT
CAATATCGTC GTGGCGGTGA AACTCACACC GAAATACTTA AAGGTGAAGT CCCAGTAAAG
CATATCGTAA CTGAAAATGG TGCTTGTTTT CAGGTGCATT TGTTACGCGG TCAAAACCAC
GGCTTATTTC TAGATATGGC AAACGGTCGT CAATGGGTAC GTGAACACAG TGCCCAGAAG
AAAGTACTGA ACCTATTTGC CTATACTTGT GGTTTTTCAG TTGCAGCACT GCAAGGTAAA
GCTGATGAAG TTGTGAATAT CGACATGAGT AAAGGGGCGC TGTCTATTGG AAAGCAAAAC
CATATACTCA ACGATTTCAA AGCTGGTGCA CGCTTTCTTG GTCATGACAT ATTTAAATCA
TGGGGTAAGC TGACAAAGTT AGGGCCTTAT GATTTGATTA TTGCCGATCC ACCAAGCAAT
CAAAAAGGCA GCTTTGTTGC GACTAAAGAT TATGCTCGTT TGCTCAAGAG ACTTCCTGAG
TTGTTAAGTG ATGACGGCGA TATGCTGCTT TGCTTAAATG CGCCAGAGTT GAGTATCGAG
TTCTTAATGG ATCAGGTAAA AGAGTACAGC CCAAGCCTAG TGTTTTGTGA GCAGCTTGAA
AATCCAGCTG TGTTTGCAGA CGTGGATCCT AACAAAGCCC TTAAAGTGCT GCGATATCGA
AAGCAGTGCT AG
 
Protein sequence
MQLFIEAVKQ VDFPEDVTRL FHGRGGRFSG CEHLCLDWYS PVVLLTSFKV LESAERDALC 
AAIEQRWFEL RGDEPLNLVF QYRRGGETHT EILKGEVPVK HIVTENGACF QVHLLRGQNH
GLFLDMANGR QWVREHSAQK KVLNLFAYTC GFSVAALQGK ADEVVNIDMS KGALSIGKQN
HILNDFKAGA RFLGHDIFKS WGKLTKLGPY DLIIADPPSN QKGSFVATKD YARLLKRLPE
LLSDDGDMLL CLNAPELSIE FLMDQVKEYS PSLVFCEQLE NPAVFADVDP NKALKVLRYR
KQC