| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1662 |
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| Symbol | |
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| ID | 5662058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2013039 |
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| End bp | 2015492 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236249 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501521 |
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| Protein GI | 157961487 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000552359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTAA GTTTAGCTTG GCGATTGTTT AAGAGGGAAC TATCTCAGGG GCAACTGTTG
TTGATCATTC TTGCTATTAC CTTGGCGGTA TTATCGGTGA CAGGCCTTGC GAGTGTCAGC
GAGCGTTTGC AGTTAGCAAT TAATGGTCAG GCGTCTAAGT TTATTGCAGC CGACCGCATT
ATCGATTCGC CCAATGAGAT AAACCCTCAA GTGCTGCAGT TAGCAGACAA AAATGGTCTC
TCTCGCGTTG GCAGCATGCA GTTCAACTCT ATGGTTTATG CTGGCGATGC ATTCCAATTG
GTCACAGTAA GAGCGGTTGA GCAAGGATAC CCACTCAAGG GGGATATTGA GCTAAGTGGC
GGTAAAGCTC AGGGCTTACC TAAGGCCAAT ACCATTTGGT TTGAAACTCG CTTAGGCGGG
CTATTAGGTT ACCCCGAGCA GATTGAACTC GGTAATGCTA ACTTTGCTCT ATCTCAGGAG
ATCATTCGCC TTCCTGATGC GGGCTTTAAT CCGTTTGCGT CATCTCCCGT GGTGTTGATG
CGTATCGAAG ATGTGGCGCA AACTCAAGTG ATCCAGCCTG GAAGCCGCGT CACCTATCGA
TACCAGTTTA CCGGTGATAG CCAGCAGCTA ACGGCATTTG AGCAACAAGC AAAGCCGCTG
CTGAACACTA GTCAGCGCTG GGTCGATGTG CAATCTGGGG ACTCGCCAAT TGCAGGGGCT
GTAAAACGTG CAGAGCGATT CTTATTGTTA GCCAGTCTGT TAGGTATTGC GCTTGCCTGT
GCGGCCATAG GTATTGCAGC GCAAAGATAC TGTCAGCGCC ATTATGACGT GGTGGCCATG
CTGAAAACCT TTGGCGCTTC GGCGAAGCAG ATACGAGTGC TATTTGGTAC GCATCTGCTG
CTGGTTACCG CCGTTGGCGT GGTGCTTGGC TTGTTAGGAG GTTTTGCCCT TGATAGGGGG
ATCACTGCAT TCTTACCGGC AGAGATAGCT TCATATTCGC CACCGATTAT GCGGCCAATT
ATGCTTGGTT TAGGCACTGG CTTTATCAGC GCCTTTATGT TCTCGGCATA CCCACTAATG
CGCTTGTTGG CAATTCCGCC TCTAAGGGTG TTACAACGTC AGCTAGAGGG GCTGCAATTA
GGCATGTGGT TGCATCTTAT TTTAAGCCTG AGTGCTATGG CACTACTGGG TTACCTCTAT
TCACAAAGCT TGGCATTAAC CTTAACCGTT GTTGCAGCGG TATTGCTGCT TGGCGTGTTA
TTGAGTGTAT TGGGCTTTTT CATGATCCGT TTGGGCCATA GTGTCGGCAT GAAAACCACT
AATCCTTTGC AGCTGGCGCT CGCAGGCCTT AGACGCCGAG CCAAACAAAA TGCGGTACAA
CTGGTCGGAT TTAGTAGTGC CTTAGTATTG CTGCTGACGA TTTTGGCGCT AAGGCAAGAC
TTGTTACAGG AGTGGCAAAA GCAGCTACCT GAAAACTCGC CAAATTATTT CTTGGTTAAT
ATTGCGCCAG AAGAAACGCA AACAATTTCA GACTTCTTGG CGCCTCACCT GAAATCATCA
CCGATTATTT ATCCTGTCAT TCGCGGTCGT TTAACCGAGA TAAATGGTGA GGAGTTGATC
TCTAGCGCGC AAAAGCAAGA TGGGCTAGAG GGGAGAGTCG GGATTTCCCG TGAGCTTAAC
CTAACCTATC AAGAAAGCTT ACCGCCCAAT AACGAGATCT TAGAGGGCAG CTTTAATCAA
GATAAGTTTG ATGTCTCGGT AGAGTCTGGC GTGGCAGAAA GGCTTGGCTT ATCGATAGGC
GACAACTTAA CTTACACCAT AGATAACCAA TCGCTAACGG TTAAGGTTGC CAGTATTCGC
GCGGTGCACT GGGAAACATT GCAACCCAAT TTCTTTATGA TTTTTACAAA AGAGGCGTTA
GCATCCTTTG CCTATACCTC GATGTCGAGT TTTCACTTAG ATGACTCTCA ACGAGGGCTT
ATTCTGGATT TGATCAAGCA GTTTCCGACT GTATCTATCA TTGATGTCGG CGCGATGGTG
AGTCAGCTCA GGCAAATAAT CGATCAAGTC TCACTGTCAT TGTCTCTGGT GTTGGTCTTA
GTGTTGCTGG CGAGTGCGCT CGTGATGATA GCGCAAACAG AAGCGGGCAT GGCGACAAGA
CAAAGAGAGC TTGCGGTATT GCGTACCTTT GGCGCATCTG GATGGCTGCT GCGCGCTGCT
ACAGGGCTTG AGTTTGCTTT GTTAGGGACC ATAGCGGGTA TTTTAGCGGT GGTTGTCGCG
GAGTTCACTC TATACCTGTT AAAGACTCAG GTGTTTGAGC TTAATGTATA CATGCATTGG
CCGTGGTGGG GGATAGCTCC GTTATGTGGC GGTTTGGTGG TTGCTTTGCT GGGAATATGG
CGTTGTAGGC AACTATTAAA TAAGTCCTGT GGTGAGTTAC TTAAAGCGCA CTAA
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| Protein sequence | MELSLAWRLF KRELSQGQLL LIILAITLAV LSVTGLASVS ERLQLAINGQ ASKFIAADRI
IDSPNEINPQ VLQLADKNGL SRVGSMQFNS MVYAGDAFQL VTVRAVEQGY PLKGDIELSG
GKAQGLPKAN TIWFETRLGG LLGYPEQIEL GNANFALSQE IIRLPDAGFN PFASSPVVLM
RIEDVAQTQV IQPGSRVTYR YQFTGDSQQL TAFEQQAKPL LNTSQRWVDV QSGDSPIAGA
VKRAERFLLL ASLLGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASAKQ IRVLFGTHLL
LVTAVGVVLG LLGGFALDRG ITAFLPAEIA SYSPPIMRPI MLGLGTGFIS AFMFSAYPLM
RLLAIPPLRV LQRQLEGLQL GMWLHLILSL SAMALLGYLY SQSLALTLTV VAAVLLLGVL
LSVLGFFMIR LGHSVGMKTT NPLQLALAGL RRRAKQNAVQ LVGFSSALVL LLTILALRQD
LLQEWQKQLP ENSPNYFLVN IAPEETQTIS DFLAPHLKSS PIIYPVIRGR LTEINGEELI
SSAQKQDGLE GRVGISRELN LTYQESLPPN NEILEGSFNQ DKFDVSVESG VAERLGLSIG
DNLTYTIDNQ SLTVKVASIR AVHWETLQPN FFMIFTKEAL ASFAYTSMSS FHLDDSQRGL
ILDLIKQFPT VSIIDVGAMV SQLRQIIDQV SLSLSLVLVL VLLASALVMI AQTEAGMATR
QRELAVLRTF GASGWLLRAA TGLEFALLGT IAGILAVVVA EFTLYLLKTQ VFELNVYMHW
PWWGIAPLCG GLVVALLGIW RCRQLLNKSC GELLKAH
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