Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1657 |
Symbol | |
ID | 5662054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2006118 |
End bp | 2007305 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641236245 |
Product | hypothetical protein |
Protein accession | YP_001501517 |
Protein GI | 157961483 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.646777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAC TAACTCTACT TATGCTACTT ATGTCGTTAA TTAGCTGTGG TGGCTCAGAT GAACAAGCTG ACACAGCTGT TCAAGGCGAA GTGCCGAGCG TGACTCCTGA TCCCACTCCT GACCCAACAC CCGATCCGAG CTCCGCCTGC GAAGCGAGCA CCAGCGAGGT AAACTGGGAC GCCTTAATGA ATGAGGATTG TGAGTCATTG GCCCAGTATG GTCTGTTTGT CGACTCAAGC ATTCCAACTA GCTCTCCCAT TTTACCTGGA GTCCCGTATC AATTATCGAC TCAACTCTTC TCTAACTACG CCAGTAAACA CCGCTTCATC TATGTGCCTG AAGGCAAAAG CCTTAGCTAT AACGCCACAG AGACGTTCGA TATGCCAGTG GGGACGGTAT TAGTCAAAAC CTTTTCCCTG CCTTTCGATA CACAGGTAAC GGGTGCTGGT AATGAAGTAT TAATTGAAAC ACGACTACTG ATCCACCGAG AGGCAGGCTG GACGACGCTG CCTTACATCT GGCAAGACGG CGAAGCGACT CTTCAACAAG CTGGTATGGA TATAGCTCAT ACCCTTAACC ACAAAGGCGA GAGCCAAAGT TTTGCTTACC ATGTTCCGAG TCGAGCCGAA TGTAAGCTCT GTCATCAAAC GGGTGGTGAT AATAGCAGTA GTATTGATCC CATTGGCTTA AAGGCTCACC TACTCAATAG ACCTGTGTCT TATCGAGGCA GTGAGATTAA TCAGCTAATG TTATGGCAAC AACTCGGTCT GCTCACGGAC CTGCCTGAGC TTGCACAAGT TGGCAAAGCC TATGATATAT TTGATGAGTC TGCACCATTA ACAATCAGGG CAAAAGGATA TTTAGATATT AACTGCGCCC ATTGCCATAA CCCACAAGGT TTTGCCAGCA TTTCAGGATT AAGGCTGGGA TTTTACGTGG ACCATACCAG CTTCGAGTAT GGTATTTGTA AGCAGCCGCC GGGGTGGGAT GGCGGCGCAA AGGGTTTGTC CTATGACATT ATTCCCGCAG ATGGTGAACA CTCTATTGTG GTTTACAGGC AAGAGCTCAA TGAGCCTAAA GATAGAATGC CGCCAATAGG CCGTAGCATA GCTCATACAG ACGCTGTAGC ACTCATAGAG CTGTGGATTG ATGAAATGGC GCCTGAGCTT GGTAATTGTC AGCAATAA
|
Protein sequence | MRKLTLLMLL MSLISCGGSD EQADTAVQGE VPSVTPDPTP DPTPDPSSAC EASTSEVNWD ALMNEDCESL AQYGLFVDSS IPTSSPILPG VPYQLSTQLF SNYASKHRFI YVPEGKSLSY NATETFDMPV GTVLVKTFSL PFDTQVTGAG NEVLIETRLL IHREAGWTTL PYIWQDGEAT LQQAGMDIAH TLNHKGESQS FAYHVPSRAE CKLCHQTGGD NSSSIDPIGL KAHLLNRPVS YRGSEINQLM LWQQLGLLTD LPELAQVGKA YDIFDESAPL TIRAKGYLDI NCAHCHNPQG FASISGLRLG FYVDHTSFEY GICKQPPGWD GGAKGLSYDI IPADGEHSIV VYRQELNEPK DRMPPIGRSI AHTDAVALIE LWIDEMAPEL GNCQQ
|
| |