| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1656 |
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| Symbol | |
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| ID | 5662053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2005072 |
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| End bp | 2006100 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236244 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001501516 |
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| Protein GI | 157961482 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.359761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAG CCTGTAGCTA TAAACCGCAT ATGAGAGTCG GCGACCAATC CTATCCAGCC
TATGAACTGA AAAACCTCAT AGGTTACCTT AAGTTGTATT TTTCTCATGA GCTTGTTGAG
CAGCTTTATA CTGATATTGG AATCGGTGAA GCAGAGCTCA TGCTGAGTCA ACATGTGTAT
GTGTGGCAGG TTGATTATGC CATGAGTTAC ATTCGTAACT TAACTCAAGA TGCTGAAGTG
GCGGCCAAGG CCGCATCGGC TTATAAGGTT AACGATCTCG AACCCTTGTT GCCCCATTTA
GCCCAATTTA AGACGTTAGG TGAATGTTTG CAGTTTGCCG TTTCTCACCC AGAATTGGTT
GGCAGTTTTT CTGATACCCT ACTTAGAAAT AATGATGGCT GTTTGCACGT CAGATGGTTA
AACACCAATC GTGTCGATAT CGAGCGATAC AGCTGCCAAT TTCAGCATAG TGTCTGTTCA
CTGTTAGCCT TTGCTAAGGA GCTGACAGGT GAGGCGATAA GCGTCTCACA TCTCGCCCTT
GCTGAGCCTT ATCGTGAAGC TAAATTTTTA ACGGCGCAGT CGGGAACTGA GATCGTATTT
GATGCGGAAT TTTTCGAGTG GTCGATTGAA CACCGCTACC TAGCGCTACC CATTACCTTT
GAGTTTGTTG CTGAGCAGGG CGAGCGTTGT ATTGATAACT CACGCTCCTA TATTGCAGAG
CTATTGGCGA TTCTACGACA GCAAGCCCCT GCATTACCAA ACATGGAGGA GATGGCTGGC
TTGCAAAATA TTAGCGCTAG AACCTTAAGG CGTAGATTGG CCGCTGCCAA CACCAGCTAC
CAGAAACTGG TGGACCAAGT GCGCTGTCAG ATGGCGATTG ACTTGATTCT AACTAGCGAC
TATTCAATCG ATGAAATTTC CGATCTCATG GGGTTTGGCG ATGTTAGCCA TTTTAGACAG
AGCTTTAAGC ATTGGATTGG TCATCCCCCC GGACACTTTC ATAGGCTTAA TCGCCCTTTA
ACGAATTAA
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| Protein sequence | MQQACSYKPH MRVGDQSYPA YELKNLIGYL KLYFSHELVE QLYTDIGIGE AELMLSQHVY
VWQVDYAMSY IRNLTQDAEV AAKAASAYKV NDLEPLLPHL AQFKTLGECL QFAVSHPELV
GSFSDTLLRN NDGCLHVRWL NTNRVDIERY SCQFQHSVCS LLAFAKELTG EAISVSHLAL
AEPYREAKFL TAQSGTEIVF DAEFFEWSIE HRYLALPITF EFVAEQGERC IDNSRSYIAE
LLAILRQQAP ALPNMEEMAG LQNISARTLR RRLAAANTSY QKLVDQVRCQ MAIDLILTSD
YSIDEISDLM GFGDVSHFRQ SFKHWIGHPP GHFHRLNRPL TN
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