| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1650 |
|---|
| Symbol | |
|---|
| ID | 5662047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1993853 |
|---|
| End bp | 1996351 |
|---|
| Gene Length | 2499 bp |
|---|
| Protein Length | 832 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641236238 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501510 |
|---|
| Protein GI | 157961476 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000305835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCTTTTTGGG CGTAGCAATC ACCTCTGCAT TAGGTTTAAC CGCTTGTAGT
GAAGACAGTT ATAATGAATT AGTGGATAAA ACTGAGCCTT TGGTTCCTCA GTCAGTTATC
GTTTTTGATC CGGGAAATGG TGAGTTACCA CTACCCAATG ATATTCTCTT TAGCGGCACG
ACCGATGGCA CTATTAACAT TCCTAAAAGT GATGATCCCA CAGCGCCAAG TGAAGAGAAC
GGCGATTATA CTGATCCGAG TATCGCACTC GGTGCGCTAG ATGGTTGGTC GACAACGGCG
CCAATCAGTA TTGAAGTCGC CCCAGCCATG GATAACGATG GCGCTATGCT GACGCTAAGT
AAAGCATCGG TTGAGCAGCC TGGCGCAGTC AAGATGTTTG AAGCCACGGT TGGTGGCGCC
TTATCATCGG ATCCAGAGTG TAAAGCACTG CCAGATATTA CAGCCTGTAA GGTTGGCGCA
GAGCTGCAGT TTGGTGTGGA CTTTGTGAGC ACCACTTCTG GTAATACCAT CGTCATCGTT
CCATTAAAGC CGCTTAAATC TAATCAATCT TATGTTTATG CTACAACCGG TCTTATCCAA
GACTCTGCGG GTCGATCTAT TTCTCCGTCT TCAACATATG GCTTATTAAA GCTTGATATC
GAAACCAAGC CACTACAGAC TCCCGAGCAA CTCGCGCTGC AAGCGGCAGT AAACAGTTAT
GAAAAAGGTA TGGCTGGAGC GGGAGTTGAC TCTGAATCAA TAAGTTATTC AGGCCTGTTC
ACCACTCAGT CAGTCGCCGA TGTGTATGAA GTATCAAAAC TACTGATCGC AGGTGACCCT
GACTATATGC CAGAGTTTGT ACAGATGCCA ACAGACAGTG GCTATACATT AGCACAAGCT
TTGATGATGC CAGAACAGCA CCCAGCATAT GAAGGTGCAA GTAAGGTCAA TGTTTGGTCT
GCTGCAATTA AACTACCTGT TTACGGTGAT TGTTCATCTA CTGAATGTCT AGATGCTGAA
GGTAATCCAA CGATTAATGG TATCTGGTCT GCGGCTTATG ACAGCCCGGT CTCAGTGTTA
AAAGCCCTTG AAAGCGGCAC CTTGAGTCAA GAGAGCTATT TCACTCAAGC CATTGAGAAT
GGAATAGAGG ATCCAATTGC TGCGCTGAGC GATCCTGCTC AACTGGCGGG TAAGCATTGG
ATGTTAGATG ATGGCACTGC CGTTGATAAA GCAAGACACC TAACTAAGTT TAACCCCATT
CCAGAGGTTA AAAATTACGA AGTAGTACCA GTGCAAATGA CAGTGCCAAA CTATGCGCCT
GCTCCAGCAA CTGGCTGGCC AGTGACAATT GCCATGCATG GTTTAGGTGG CGGTAAAGAG
ATGGCGTTTG CTTTCGCGGG CACTTATGGT GAACTTGGCG TAGCCACAAT CGCAATTGAT
ATGCCACTTC ACGGCGCTCG CTCATTTGGT AAGGGCTTAC TGGTTCCTGG TGCTTATACT
GTTTCGGCAA CGGATCCTGC CTATGGTGCA GTTATTGGTG ACGATGTTCT TTTCTCAATG
GGTGACCCGT TAGCTTTCAT TAATATCGGT AGTACATTGA CTGTGCGTGA TAACTTCCGT
CAGGCGACAT TTGATCATTT AGCCCTTCGC GCCGCGTTTA CCGGTTATGC TGGCAAGCTA
ATGGAGTTAC AAGCGCCTCA ATTATTTGAT ATTAATAAAT TTAGTGCTCA AGGCTTGAGT
CTAGGTGCTA TCGTTGGCAC TAACTTTGCC ACTTACGCTA GCACAGGCCT GACTCATCCA
TCTGGAGCTG ATTTAAGCCA CGTTTATAAA CTTAATGCTA CGTCACTCGT CGCCCCATCG
GGTGGATTTG CTGGAACCTT TATCGGCTCA GCGACATTTG GTCCTATGCT GTTTGAAAAC
ATAGTGGCGA CAGAAGCATT TATGGCGTTA GTCGATGAAG CGAACAAAGA TTTAGGTTAT
CTACCTGATA CGCCTGAATA CGATGCGTTA GTTAAGTCCG TGTATGATGC ATTTTTACCG
ACATTTGCTT TTGCGGTTCA AACGGCTGTT GATAGTGCAG ATCCGATTAA CCACGCAGCT
ATGCTTAAGT CTACTGGACT TCCACTTCAC TTAATTGAAG TTGTCGGTGA TGGAGCAAAC
AGTCTTCCTG ATCAGACACT ACCTAATAGT GTTGCAGGTT TCCCTACTTC AGGTACAGAA
CCTTTGATTG CAAACCTAGG GCTTGCATGT ATTGATAGCA CAACTGTTGG CTCAGGAGCT
GTACGTTTCT CTAAAGGCCA TCACAGCTCG CTAGTTGACC CATCGCCAGT TGATGGAGTT
ACAGATGGTT TTGAAGATAT TGCAACGGTA GAGATGCAAA CTCAGGCCGC TTTCTTCTCA
CACAGTGCAG GGATCCCTAC AGCCGATAGC CCGACTATTT ATCTAGGTCT AGTCACAGAG
GAAGCTGCAC AATATGTTGT GGCACCCTGT GCCCAGTAA
|
|---|
| Protein sequence | MKKLFLGVAI TSALGLTACS EDSYNELVDK TEPLVPQSVI VFDPGNGELP LPNDILFSGT
TDGTINIPKS DDPTAPSEEN GDYTDPSIAL GALDGWSTTA PISIEVAPAM DNDGAMLTLS
KASVEQPGAV KMFEATVGGA LSSDPECKAL PDITACKVGA ELQFGVDFVS TTSGNTIVIV
PLKPLKSNQS YVYATTGLIQ DSAGRSISPS STYGLLKLDI ETKPLQTPEQ LALQAAVNSY
EKGMAGAGVD SESISYSGLF TTQSVADVYE VSKLLIAGDP DYMPEFVQMP TDSGYTLAQA
LMMPEQHPAY EGASKVNVWS AAIKLPVYGD CSSTECLDAE GNPTINGIWS AAYDSPVSVL
KALESGTLSQ ESYFTQAIEN GIEDPIAALS DPAQLAGKHW MLDDGTAVDK ARHLTKFNPI
PEVKNYEVVP VQMTVPNYAP APATGWPVTI AMHGLGGGKE MAFAFAGTYG ELGVATIAID
MPLHGARSFG KGLLVPGAYT VSATDPAYGA VIGDDVLFSM GDPLAFINIG STLTVRDNFR
QATFDHLALR AAFTGYAGKL MELQAPQLFD INKFSAQGLS LGAIVGTNFA TYASTGLTHP
SGADLSHVYK LNATSLVAPS GGFAGTFIGS ATFGPMLFEN IVATEAFMAL VDEANKDLGY
LPDTPEYDAL VKSVYDAFLP TFAFAVQTAV DSADPINHAA MLKSTGLPLH LIEVVGDGAN
SLPDQTLPNS VAGFPTSGTE PLIANLGLAC IDSTTVGSGA VRFSKGHHSS LVDPSPVDGV
TDGFEDIATV EMQTQAAFFS HSAGIPTADS PTIYLGLVTE EAAQYVVAPC AQ
|
|---|
| |