| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1630 |
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| Symbol | |
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| ID | 5662027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1975184 |
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| End bp | 1976077 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236218 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501490 |
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| Protein GI | 157961456 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACC CTATTTGGTT AAAGACTTTT ACAACCCTTA TCGAGACAGG CCATTTCACT
CAAACCGCAG AAAAGCTGTT TATGACCCAA CCCGGAGTCA GCCAACAGAT TAAAAAGCTT
GAGCAGGCCT GTGGCTACTC TCTGATTAAA AGAGTGAATA AGCAGTTTGA AATTACTGAG
CAAGGCAGGC TGGTCTACGA GCACGCTCAA CGGATGGCGC AGCAAGAAAT TGAACTAATA
GAAAATCTAG CCTTTGATGA TCCTTACTCG GGCCAATGCC GTTTATCTTG TTCAGGCGCT
TTAGCACTTC TGTATTACCC AAAGTTACTC AAACTGCAGC AGGAACATCC GGCGCTGGCT
ATGCATTTAG AGGCGGCACC AAACTATAGA ATACTAAAAG ATATTACCGA AGGAACAATC
GACATCGGCG TAGTCACCCA ACTCCCAAAC TTAGGTGAGT TCAACTTTGA AGCCATAGGT
CTTGAACCAC TTTGTCTTAT CATGCCAAAG CAGTATCAAA ATAGAGTGAT TGATCCTCAA
TGCCTAATGC AATGTGGAGT TGTTAATCAC CCTGATGCTG CGCACTACTT ATCACGCTAC
TTCGAACTAT GCGCAAATCC AGAGCTTGCA CAGGTGAATA TCAACCAACT CCCCATGACC
AGTTATGTTA ATCAGCTCAG TCAGATCTTG TTGCCAATCT CCCAAGGACT AGGTTTTACC
GTACTCCCAA AAAGTGCATT AGACAGTTTT GCCGATAGAG ATCAGCTGCA TGTACATAGC
CCAGATACAG CCGTTACTGA GTCACTGTAT TTAGTCTCTA AACGAAATCG TGAGCTAGCT
GCGCGTTATC TTGCCGTGAA AAACATTTTA AAAGCGAGTC ACTCAATACC ATAA
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| Protein sequence | MLNPIWLKTF TTLIETGHFT QTAEKLFMTQ PGVSQQIKKL EQACGYSLIK RVNKQFEITE
QGRLVYEHAQ RMAQQEIELI ENLAFDDPYS GQCRLSCSGA LALLYYPKLL KLQQEHPALA
MHLEAAPNYR ILKDITEGTI DIGVVTQLPN LGEFNFEAIG LEPLCLIMPK QYQNRVIDPQ
CLMQCGVVNH PDAAHYLSRY FELCANPELA QVNINQLPMT SYVNQLSQIL LPISQGLGFT
VLPKSALDSF ADRDQLHVHS PDTAVTESLY LVSKRNRELA ARYLAVKNIL KASHSIP
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