| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1626 |
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| Symbol | |
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| ID | 5662023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1967581 |
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| End bp | 1968459 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236214 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001501486 |
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| Protein GI | 157961452 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.954407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAT GGGTTGAGAA GATCTCCTTT AACGAAGCCA GTCCATTAGC AGTGCAAGCT
CAAGATACTC AATTTGGCTT ACATCGTAAA AAACCCGCTG TAATGCCCCA TAGTCATTGG
CATGGCCATA TAGAGATCAA TTACCTGTTT GATTGCTCAG CCGATTATCT GATTAATGGC
CAAGAGATCA CTGTGCCTGA GGGGCGGATG ATCATCTTTT GGGCCTCTTT CCCCCATCAA
ATGGTCGCTT CTCGTGGCGA CGGCGAGCTA GTCAATATCT ATATCCCGTT GCAATCCTTT
TTGACATGGA TGCTGCCAAG TAGCTTTGTG AGTCAGTTGC TGCACGGCGA GGTTATCGTG
TCTGACAGCT TATATGCTTG CGATAAAGAG CTGACGCAGA TCTGGGAAAC CGATATTAAA
CGAAATGCCC CTTTACTAAC CAGCCAGGTG ATTAACGAGA TCCGCGGCCG AATTCGACGC
ATGTCGATAG AGGACTACAG CACCTTCGAG CTAGCGAATC GAGTGGCGAA ACAGGAAGAT
AAACCCGTGT TTGGTGGCTT AAACCATATC CAAACCATGT TGCGTTATAT TGCCGACAAT
TACGATCAAA AAATTACAAT TGAAAATGTT TCAACCTCTA CTGGCTTACA TAAAAACTAT
GCCATGAAGT TGTTTAATCG GGTGATGAAA GTGTCGATTA AGCAATACAT TAACCAGCTT
AGGCTACAGC ATGCCCAGGC GCTCCTTATC GATACCCAAA GTCCTGTGCT CAATATTGCA
CTGGAAGCGG GCTTTGGCTC AGTTAGTCGC TTCTATGATA TTTTTCAGCG AGAATTTGGC
ATGTCGCCAC TTGAATTCAG ACGAAAAGTA AATTGCTGA
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| Protein sequence | MFEWVEKISF NEASPLAVQA QDTQFGLHRK KPAVMPHSHW HGHIEINYLF DCSADYLING
QEITVPEGRM IIFWASFPHQ MVASRGDGEL VNIYIPLQSF LTWMLPSSFV SQLLHGEVIV
SDSLYACDKE LTQIWETDIK RNAPLLTSQV INEIRGRIRR MSIEDYSTFE LANRVAKQED
KPVFGGLNHI QTMLRYIADN YDQKITIENV STSTGLHKNY AMKLFNRVMK VSIKQYINQL
RLQHAQALLI DTQSPVLNIA LEAGFGSVSR FYDIFQREFG MSPLEFRRKV NC
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