| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1617 |
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| Symbol | truA |
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| ID | 5662014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1958601 |
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| End bp | 1959386 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236205 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001501477 |
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| Protein GI | 157961443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0232986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGGTTG CGCTAGGTAT AGAGTACGAT GGTAGTCAAT ATTTCGGATG GCAACGTCAG
GCGGAAGTTG ACACAGTGCA AGAGCGATTA GAAAAAGCGC TTTCTATTGT TGCCAACGAA
CCTATTGCAG TGCACTGTGC TGGCCGAACT GATGCGGGCG TCCACGCGAC AGGTCAAGTG
GTTCACTTTG AAACCAATGC GATTAGAAAA GAGACGGCTT GGACACTAGG CGTCAATGTT
AACCTGCCTG ACAATATTGC TGTGCGCTGG GTTAAAGTCG TTGATGATGA ATTTCACGCA
CGTTTTACTG CTACGGCAAG ACGTTATCGC TATATGATTT ACAATCACCA GCTTCGTCCA
GGCATTTTGC GTAGCGGTGT CAGTCATTAC CCAGGTGATA TCGACGAGTC TAAGATGCAT
CAAGCCGCGC AGTACCTTCT CGGTGAGCAG GATTTTACTA GTTTTAGAGC TGTTCATTGT
CAGTCTAATA CGCCGTTTCG CTGCGTGCAT GAAGTTAACG TGACGCGTCA AGGGATGTAT
ATCTGTGTCG ATATTAAGGC TAATGCTTTC TTACATCACA TGGTGCGCAA TATTGTAGGC
TCTCTGTTGG AAGTCGGTTT AGGTAATCAG TCTGTCGAGT GGATTGAACA GCTACTGGCG
CTTAAAGACA GAAATAAAGC CGCAGCAACT GCCAAGCCTA ACGGCTTGTA TTTAGTGGAC
GTGACTTACC CTGAAAGCTA CCAATTGCCT AAGTTGTCAC TTGGCCCATT ATTTATGTTG
GACTAA
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| Protein sequence | MRVALGIEYD GSQYFGWQRQ AEVDTVQERL EKALSIVANE PIAVHCAGRT DAGVHATGQV
VHFETNAIRK ETAWTLGVNV NLPDNIAVRW VKVVDDEFHA RFTATARRYR YMIYNHQLRP
GILRSGVSHY PGDIDESKMH QAAQYLLGEQ DFTSFRAVHC QSNTPFRCVH EVNVTRQGMY
ICVDIKANAF LHHMVRNIVG SLLEVGLGNQ SVEWIEQLLA LKDRNKAAAT AKPNGLYLVD
VTYPESYQLP KLSLGPLFML D
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