Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1613 |
Symbol | |
ID | 5662010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1953056 |
End bp | 1954072 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236201 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001501473 |
Protein GI | 157961439 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000186594 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAGG AATTTAATGT TGTCGTATTA GGTGCATCGG GCGCAGTGGG TCAAACAATG ATTGAGATCC TCGAAGAGCG TAACTTTCCG GTTGCTAATT TATTTCCATT AGCCAGCAGT CGCAGCGCCG GTAATACGGT CAGCTTCCAC GGTAAACAGG TCGAAATTTT AGATGTAGAC ACCTTTGACT GGTCACAGGC CCAAATCGGT TTCTTCTCTG CAGGTGGTGA CGTATCAGCT AAATGGGCTC CCATTGCTGC TGAAAACGGT TGTGTTGTTA TCGATAACAC CTCTCACTTC AGATATGACA TCGACGTGCC ATTGGTGATC CCAGAGGTAA ACCCTGAAGC GATTGCCGAT TTCAGAAACC GTAACATCAT TGCTAACCCT AACTGTTCAA CCATTCAGAT GTTGGTTGCG CTTAAGCCTA TTTATGATGC ATACGGTATT TCGCGTATTA ACGTGGCGAC TTACCAGTCT GTATCGGGAT CGGGTAAGCA AGCTATTGAA GAGTTAGCAG GCCAGTGCGC TAAGCTTTTA CAAGGTTTAC CTGTAGAGCC TAAGACTTAT CCTAAGCAAA TTGCGTTTAA CGTATTGCCA CAAATCGATA AGTTTATGGA TAACGGCTAC ACCAAAGAAG AGATGAAAAT GGTGTGGGAA ACGCAGAAGA TCTTTGGTGA TGACAACATC GTTGTGAACC CAACGGCTGT GCGTGTACCA GTATTTTACG GTCACTCAGA AGCTATTCAC CTAGAGACAT TACAACCTGC TGATGCCGAA GACATTAAAT CCGTATTACG TGGTGCCGAC GGTGTAGAAC TATTCGAAGG TGATGAAGAT TACCCAACTG CGATAACAGA AGGCGCAGGT ACCGATCCTG TTTATGTTGG TCGTGTGAGA AAAGATATCT CCCATGAGAA TGGCATAAAC CTTTGGGTTG TATCAGATAA CATTCGTAAA GGCGCAGCAC TTAACAGTGT GCAAATCGCT GAAGTTTTGA TTAGAGATTA TTATTAA
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Protein sequence | MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLFPLASS RSAGNTVSFH GKQVEILDVD TFDWSQAQIG FFSAGGDVSA KWAPIAAENG CVVIDNTSHF RYDIDVPLVI PEVNPEAIAD FRNRNIIANP NCSTIQMLVA LKPIYDAYGI SRINVATYQS VSGSGKQAIE ELAGQCAKLL QGLPVEPKTY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDNI VVNPTAVRVP VFYGHSEAIH LETLQPADAE DIKSVLRGAD GVELFEGDED YPTAITEGAG TDPVYVGRVR KDISHENGIN LWVVSDNIRK GAALNSVQIA EVLIRDYY
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