| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1612 |
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| Symbol | |
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| ID | 5662009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1951920 |
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| End bp | 1953053 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236200 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region |
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| Protein accession | YP_001501472 |
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| Protein GI | 157961438 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000543146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAGA TCCTTGCCGA TGAAAATATG CCTTATGTTC AACAGTTATT TGGTGACTTA
GGCACGATTG AAACCGTAAA CGGTAGGGAG CTAACGCCTG AGCAAGTTAA CGATGCCGAT
GTGTTACTCG TTCGCTCTGT GACTAAGGTG AATCAAGCCT TATTGGCAGA GAATAACCAA
CTTAAGTTTG TTGGCAGTGC CACCATAGGC ACAGATCATA TCGATGTTGA ATACCTTGCA
AGTCGCAATA TTCCCTTCTC TAATGCGCCG GGCTGTAACG CCACCGCTGT GGGGGAGTTT
GCCTTTATCG CCATGCTTGA GCTTGCACAG CGCTTTAATA GCCCGCTAAA AGGCAAGGTG
GTTGGTATTG TTGGTGCTGG CAACACTGGC ACAGCGGTAG CTAAATGCCT TGAGGCTTAT
GGCATTGAAG TTCTGCTTAA TGACCCATTG TTAGAAGAGA GTGGCGATCC TCGTAGCTTT
GTATCACTCG ATACCTTAAT CGAAAAGTGC GATGTGATTA GCTTGCATGT ACCGATAACT
AAAACCGGTG AGCATAAAAC TTGGTATCTG TTCGATGAGT CGAGACTTAA TAAGCTAGCT
GAAAACTGCT GGCTGCTTAA TTGCTGCCGG GGCGAGGTGA TTGATAACTG CGCCTTGATT
AACTTCAAGC AACAGCGAGA TGATGTAAAA GTGGTGCTTG ATGTGTGGGA AGGTGAGCCT
AATCCTATGC CAGAGTTGGT GCCTTATGTG GAGTTTTGTA CGCCCCATAT CGCTGGCTAC
TCGTTAGAGG GCAAAGCGCG CGGCACCTAT ATGCTCTATC AAAAGTTAGC TGAGGTGCTG
AAGATTGAGG CCGACAAACA GATGGACTCG TTACTGCCGC CGCTCTGGAG TGAGCAGGTT
AACGTACAAG AAATCAGCGA TGAAAGAGCA CTTTTGCAGC TCGCGAGATT TGTATACAAT
TTGCGCGATG ATGACGAATT ATTTCGAAAA ATGTTTCTAA ATAAGCAGGG GTTTGATCAT
ATGAGAAAAA ATCACACCCA TCGCCGCGAA TTTAGTGCAT TAAAGGTAGG CAACACGGGG
CAAACTAATG TAAATTGGTT ATCCAATTTA GGGTTTTCAG GAGTCGAGCT GTAA
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| Protein sequence | MMKILADENM PYVQQLFGDL GTIETVNGRE LTPEQVNDAD VLLVRSVTKV NQALLAENNQ
LKFVGSATIG TDHIDVEYLA SRNIPFSNAP GCNATAVGEF AFIAMLELAQ RFNSPLKGKV
VGIVGAGNTG TAVAKCLEAY GIEVLLNDPL LEESGDPRSF VSLDTLIEKC DVISLHVPIT
KTGEHKTWYL FDESRLNKLA ENCWLLNCCR GEVIDNCALI NFKQQRDDVK VVLDVWEGEP
NPMPELVPYV EFCTPHIAGY SLEGKARGTY MLYQKLAEVL KIEADKQMDS LLPPLWSEQV
NVQEISDERA LLQLARFVYN LRDDDELFRK MFLNKQGFDH MRKNHTHRRE FSALKVGNTG
QTNVNWLSNL GFSGVEL
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