| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1610 |
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| Symbol | |
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| ID | 5662007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1949979 |
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| End bp | 1950920 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641236198 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001501470 |
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| Protein GI | 157961436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0130388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATT TAAATGAAGC GCAAACCGCA AAACTGATCA CTCATCAACT GGCCTACTCA
GCTGTTAAAG AAGCGTTTAT AGCAGCCACC ACAGATGAAG CAACTTTGTT TCCTGTGGTC
AATGCATCAG GCCCTCAAAC CGACTCGATG TTTTCAATGA AGTCAGCGTC AACGGCGACA
CTAGTTGGTT GGAAAACGGG GAGTTACTGG CCGGGTAATC AGGCTAAAAA CATACCCTGC
CACGGCACCA ATGTGTTCTT ATTAAGCCCT GAAACCGGTG AGCTGGTTGC TGTAGTTGCA
GCCACGCAAG TCAATGCTTA TCGCACAGCG GCAGCAGACG CAGTTGCAGT CGATTACCTA
GCGCGAAAAG AGGCGACTGT ATTGACGGTA TTTGGCAGTG GGCACCAAGC AGAGTACGAA
GTATTAGCCA TCGCGGCAGT GCGTGATATT ACTAAGGTGA TTGTTGTTGG CCGAGATAAC
GATCGCTGCC AAGCATTCAT TAAGCGTCTA GTTGATAAAG GCTTACAAGC AGACTGTACC
GTTGCCAGCG CCCAATACGG TTGCGAAAAT GCAGACATTA TCGTGACCGC TACCACTGCC
ACTGCGCCGC TATTTAAGGC TAGCTGGGTT AAAGAGGGCA CCCATATCTC CGCCATGGGG
GCTGATAAAG TCGGTAAACA GGAGTTACCA GTGGAGCTTT ATCAAGGCGC CAGTTTATTT
TGTGACTACC GAGCGCAGTC GGTGGTTATT GGCGAATTTC AGCACTCAGA AAATGGGCAA
GTGACAGAGA TGGGCCACGT CATAACTAGC CATTCAGCAG GGCGTATTGA TAGCGCTGAG
ATTACTATTT TTGATAGCTC TGGCATCGCT ATTCAAGACC TGTTTGTTGC CGCGAAACTG
CTACAGCTGA GTGAAGAGCT AACTGAACGA GTGTTCGATT AA
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| Protein sequence | MQYLNEAQTA KLITHQLAYS AVKEAFIAAT TDEATLFPVV NASGPQTDSM FSMKSASTAT
LVGWKTGSYW PGNQAKNIPC HGTNVFLLSP ETGELVAVVA ATQVNAYRTA AADAVAVDYL
ARKEATVLTV FGSGHQAEYE VLAIAAVRDI TKVIVVGRDN DRCQAFIKRL VDKGLQADCT
VASAQYGCEN ADIIVTATTA TAPLFKASWV KEGTHISAMG ADKVGKQELP VELYQGASLF
CDYRAQSVVI GEFQHSENGQ VTEMGHVITS HSAGRIDSAE ITIFDSSGIA IQDLFVAAKL
LQLSEELTER VFD
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