| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1608 |
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| Symbol | |
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| ID | 5662005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1947713 |
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| End bp | 1948666 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236196 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501468 |
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| Protein GI | 157961434 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000207955 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCA CAGAAGATCT AAGATTCATC ACCACAATCG CCAGCCATAA AACCCTAGCC
GATGCGGCTA GGACGTTAAA TATTACTCCG CCGTCGGTAA CGCTTAGATT GCAACATATT
GAAAAAAAAC TGTCGATCAA ACTTATTCAG CGCCCCTCAA GAGTCGTGAG CCTAACGGAA
GAAGGACAAC TTTTACTGGA TAAAGGCTTG CCTATTCTGC GTGGACTCGA TGAACTACAA
GAACAGCTGG ATGAGCTTAA GGAGCATGTT TGTGGCAAGC TGAGAGTATT AGCCCCCTTA
GGTTTTGGTA ATGATTATAT CGCGCCCTTG CTTGGCGAAT ACAAGCTCCT ACATCCTCAG
CTAGATATCG AACTTGAGTT ATCCGATAAC CCCAATTGGT CTAGTCATCA TAAATGGGAC
ATCATTATCT ATATAGGTGC GCTCAATGAT TCCTCATTGA AAATGATAAC TTTGGCTAAA
AACCAAAGAT TTGTCTGTGC CTCCCCAAAA TACCTTGAGC AAATGGGAGA ACCAAAGGAG
CCTCAAGAGC TACTCAAACA TCGATGCATC GCATTAAGGG AAAACAACGA AGATGTGACC
TTGTGGCCGT TTACCAAGCT GTTACATGAG AAATTGTCAC ATGACAAGCT TTCCAACGAC
AAGCCAACCG ATGACAAACT TGAAATGATC AGGATCACGC CGACACTGGC AAGCAACGAG
GGCCGCGTCA TTAAAGATTG GGCTATGGCA GGGTTAGGCG TCATTATGCG ATCTGAGTGG
GATGTGCAGC CGCAGATCAA CAACGGTGAA CTTGTGCGTA TATTAGCCGA TTATTCACTA
CCGAACGCCA ATATAGTTGC GTTATTAAGT AGTCCAGAGA AAGAACGTTC GGCTCGTATT
TCTGGCTTTA TTCAGCTCCT CAAACAGCGA CTAACCCCGC TTCCTTGGAA GTAA
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| Protein sequence | MITTEDLRFI TTIASHKTLA DAARTLNITP PSVTLRLQHI EKKLSIKLIQ RPSRVVSLTE
EGQLLLDKGL PILRGLDELQ EQLDELKEHV CGKLRVLAPL GFGNDYIAPL LGEYKLLHPQ
LDIELELSDN PNWSSHHKWD IIIYIGALND SSLKMITLAK NQRFVCASPK YLEQMGEPKE
PQELLKHRCI ALRENNEDVT LWPFTKLLHE KLSHDKLSND KPTDDKLEMI RITPTLASNE
GRVIKDWAMA GLGVIMRSEW DVQPQINNGE LVRILADYSL PNANIVALLS SPEKERSARI
SGFIQLLKQR LTPLPWK
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