Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1606 |
Symbol | |
ID | 5662003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1945794 |
End bp | 1947068 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236194 |
Product | Beta-ketoacyl synthase |
Protein accession | YP_001501466 |
Protein GI | 157961432 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000886766 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG ATACCATTGG TGCAGCAAAA TTGGTACTAG ATGTACAAAA TGGAAAGTTA ATAATGAAAA GAGTCGTGAT CACTGGACTT GGTGTCGTAT CAAGTATCGG TAACAACAAG CAAGAAGTCA CTGAATCATT AAAAGCGGGT CGTAGTGGTA TTACCCACTC TGATCAGTTT GAAGAAATGA AGCTGCGTAG TCATGTTTGG GGCGACATTA AGATTGACCC ATCAGAATAT ATTGACCGTA AAGCACTGCG CTTTATGGGT AATGCAGCAG CTTACGCACA TATCGCAATG CAAGAAGCGA TTAAAGATGC AGGTTTAGTT GAAGAGCAGT ATTCAGACCC TCGTGTCGGT ATTATCGTAG GCTCGGGCGG CGCATCTTCA GCAAATCAGG TTCAAGCTGC TGACACGTTA CGTGAAAAAG GCGTTAAGCG CGTTGGTCCA TATATTGTGC CGCGTATTAT GTCGAGCACA GCAAGCGCAT GTTTGGCTAC GCCATTTAAG ATTAAAGGCA TGAACTACTC AATCAGTTCT GCTTGTGCAA CTAGCGCACA CTGTATCGGC CACGCGGCTG AACTTATCCA GATGGGTAAG CAAGATATGG TATTTGCTGG TGGTGCAGAA GAAGTGGATT GGACGCTTAC CATGGGCTTC GATGCTATGG GCGCACTATC GACTAAGTTT AATGATGATC CCACTAAAGC ATCTCGTACC TATGATGCAG ACCGTGATGG TTTTGTTATC TCTGGTGGCG GCGGAATCGT GGTTGTTGAA GAGCTAGAAC ACGCTCTTGC ACGTGGCGCA AAAATCTACG CTGAGATCAT CGGTTATGGC GCATCATCAG ACGGCTATGA CATGGTTGCT CCATCAGGTG AAGGTGCGGT TCGCTGTATG CAGATGGCTC TTGCCGATGT AGACACACCA ATCGATTACA TCAATACTCA CGGTACATCA ACACCTGTGG GTGATATGCG TGAGCTTGAA GCACTACGTG AAACCTTTGG TGATAACCTA CCAGCTATCG CATCGACTAA GTCTCTAACG GGTCATGCAC TGGGCGCGGC GGGTGCACAC GAAGCGATTT ATAGCTTGAT CATGATGGAA AGTAGTTTCA TCGCACCAAG CATCAACATT GATACTGTCG ATGAAAAAGC CGAAGGCATG CCAATTGTGA CTAAAATGAC TGAAAAAGAG CTCAATACTG TGATGAGCAA CAGTTTTGGT TTTGGTGGCA CAAACGCAAC TTTGGTTATG CGTAAGTACA AGTAA
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Protein sequence | MKSDTIGAAK LVLDVQNGKL IMKRVVITGL GVVSSIGNNK QEVTESLKAG RSGITHSDQF EEMKLRSHVW GDIKIDPSEY IDRKALRFMG NAAAYAHIAM QEAIKDAGLV EEQYSDPRVG IIVGSGGASS ANQVQAADTL REKGVKRVGP YIVPRIMSST ASACLATPFK IKGMNYSISS ACATSAHCIG HAAELIQMGK QDMVFAGGAE EVDWTLTMGF DAMGALSTKF NDDPTKASRT YDADRDGFVI SGGGGIVVVE ELEHALARGA KIYAEIIGYG ASSDGYDMVA PSGEGAVRCM QMALADVDTP IDYINTHGTS TPVGDMRELE ALRETFGDNL PAIASTKSLT GHALGAAGAH EAIYSLIMME SSFIAPSINI DTVDEKAEGM PIVTKMTEKE LNTVMSNSFG FGGTNATLVM RKYK
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