Gene Spea_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1601 
Symbol 
ID5661998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1940724 
End bp1941431 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID641236189 
Producthypothetical protein 
Protein accessionYP_001501461 
Protein GI157961427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00766974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAAGA GTGTTATTAC TAATCTGCTT GCGGCCATTC TTGTTGCTGT AGGTTACTTG 
TTTGCCTTAC CAATCGTACT GACCGTCGGA CTCTTTGCAC TATCTGGGGC GGTGACTAAC 
TGGTTAGCTA TTCATATGTT GTTTGAGAAG GTGCCAGGTT TATATGGCTC AGGTGTTATC 
CCATCTCGAT TCGAAGAGTT TAAACAAGCT ATCGCGAACT TGATGATGAA ACAGTTCTTT 
ACTGAAGAAA ATATTGACCG GTTTTTATCG GGTGAAGGTG GTATTGAAAA GCAACTAAAC 
TTACAACCGG TTATCGATAA TATTGATTTA TCGCCCGCAT TTGATGCCTT GGTGACGACC 
GTTGAGCAAT CCTCATTCGG CGGGATGTTA GCTATGTTTG GTGGCTCTGA CGCCATAACG 
CCGCTACGTG AACCTTTTAT TGAGAAAATG AAGAGCTCTT TGAGTGAAAT CGCCCAAAGT 
GAAGACTTTT ATGAGTTACT AAAAGCCGAA CTAGAGCAAC CCAATATGAT TGCGGATATG 
CGCGCAAAAG TGGAAGAGAT TGTGACTCAA AGACTCGATG AGTTAACACC GCAACTTGTT 
AAAGAAATCG TGCAAGAGAT GATCCGTGAA CACCTTGGTT GGTTAGTGGT GTGGGGCGGT 
GTCTTTGGTG GCTTAATAGG CCTAGCTGCG GCGCTTATTC AGGGGTAA
 
Protein sequence
MNKSVITNLL AAILVAVGYL FALPIVLTVG LFALSGAVTN WLAIHMLFEK VPGLYGSGVI 
PSRFEEFKQA IANLMMKQFF TEENIDRFLS GEGGIEKQLN LQPVIDNIDL SPAFDALVTT 
VEQSSFGGML AMFGGSDAIT PLREPFIEKM KSSLSEIAQS EDFYELLKAE LEQPNMIADM 
RAKVEEIVTQ RLDELTPQLV KEIVQEMIRE HLGWLVVWGG VFGGLIGLAA ALIQG