Gene Spea_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1599 
Symbol 
ID5661996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1936292 
End bp1936948 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID641236187 
Productpeptidase S51 dipeptidase E 
Protein accessionYP_001501459 
Protein GI157961425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.351439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCG CTCTACTGAG TGATCCCAAT ACTGAAAATG GCCAAGCGGC GATCAATGCA 
CTACTCCAAT CACTCGTTAG TATCAAAAGC CAGTCTCCGC TAAAAGTTGG CTATATCGCA 
TCACAACCGG ATCCGCAAAG AGAATACTTT CAACAGACCA AAATGCTATA TAAAACGTGT 
GGTGCAGAGC TCAGCGTCTA CCTCGAATTG GAAGCTGGCT TTTCACAACA TGCGCTAGAC 
CAGTTGCTAG ACTGTGACGC CATTCAGCTG TCTGGGGGCG ACACCTACCG TTTCTTAAAA 
GCACTAAAAT CCAGAAAGCT ACTGCCGGTT TTGCGCCAAT ATGCCATAAA TGGTGGCGCT 
CTAGTCGGCG TGAGTGCTGG CGCGATGATA ATGACACCAT CGATAGCCAG CGCCAGCCTT 
TGCGGCGATA TCAATAACTG CGAACTCGAA GACTTAAACG CACTTAATTT AGTGGATTTT 
TTATTTGCCC CTCACATTGA GCTTCACGTT AGCCAAGAGC AGCCACTGAG CGAGCCTTTT 
CAACAGCAGC TTGCAAGATT TAGCCAGCAG ATCTGCCTAT GTCCAGACGA TGCAGCACTC 
TTGTCTATAG ACAAGGAACT AAAGCAACTG GGTCAATGTC ATTGGCACTT GCTGTGA
 
Protein sequence
MKLALLSDPN TENGQAAINA LLQSLVSIKS QSPLKVGYIA SQPDPQREYF QQTKMLYKTC 
GAELSVYLEL EAGFSQHALD QLLDCDAIQL SGGDTYRFLK ALKSRKLLPV LRQYAINGGA 
LVGVSAGAMI MTPSIASASL CGDINNCELE DLNALNLVDF LFAPHIELHV SQEQPLSEPF 
QQQLARFSQQ ICLCPDDAAL LSIDKELKQL GQCHWHLL