| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1588 |
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| Symbol | trpD |
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| ID | 5661985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1926917 |
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| End bp | 1927993 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641236176 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001501448 |
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| Protein GI | 157961414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTC AAACCGAAAT CAAGCAGCTT GAAATTAAAA GCTCTGAAAC GTTAATCGAA
TCCCTTTATC GCGGTGAAAG CCTAAACCGC ACTGATGCAA AAACGTTATT TAGCCGTATC
ATTCAAGGTG AGATGAATGA AGTCACCATG GCAGGAATGT TAGTCGCCAT GAAAATGCGC
GGCGAAACCA TCGATGAAAT ATCGGGTGCG GCCGATGCAC TTCGTACGGC TGCAAAATCC
TTTCCGACGC CGAGTGAATC GACCGTCAGT CAAGGCATTG TCGATATTGT AGGCACTGGT
GGCGATGGTC ACAACACTAT CAATATCTCT ACCACGGCGG CGTTTGTTGC CGCGGCGGCT
GGAGCTAAGG TGGCTAAACA CGGTAACCGC AGCGTATCGA GCAAATCGGG TTCATCAGAC
TTACTGGCGC AATTTGGTAT CGATTTAACC ATGGCACCAG AAACGGCACG TGACTGCTTA
GACGAGCTAG GACTGTGCTT CTTGTTTGCG CCACACTATC ATGGCGGCGT GGCCCACGCG
GTGCCTGTGC GTCAGGCACT AAAAACCCGT ACTCTATTTA ATGTGTTGGG GCCGCTCATT
AACCCGTCTC GCCCAGACTT TATGCTGCTT GGTGTGTATA GCCCAGAGCT GGTAGCCCCC
ATCGCACAAG TCGTAAAAGC ACTCGGTATT AAACGCGCCA TGGTGGTGCA CGGTAGCGGC
CTCGATGAAG TCGCGCTTCA CGGCGATACC TTAGTGCATG AGCTTAAAGA TGGCGCTATC
AGCGAGTACC GTATTACTCC AGCCATGCTT GGCGTACCAG AGGCTAAGCT TACTGATTTA
GAAGGCGGCG CACCTGAAGA AAATGCTGAT TACACCCGCG CCATATTGCA AGGCAAAGGA
AAAGCTGCCC ATATGAATGC GGTTGCTATC AATGCAGGCT GCGCCCTCTA TGTGGCAGGC
ATTTGCACTG ACATCAAATC TGGCACAGCG TTAGCACTCG AGACCATTAA CAGCGGCAAA
GCCTACAAAT TATTGACCCA GCTGGCTAAC GCTAGCCAAG CTGGCAAAGG AGCCTAA
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| Protein sequence | MMTQTEIKQL EIKSSETLIE SLYRGESLNR TDAKTLFSRI IQGEMNEVTM AGMLVAMKMR
GETIDEISGA ADALRTAAKS FPTPSESTVS QGIVDIVGTG GDGHNTINIS TTAAFVAAAA
GAKVAKHGNR SVSSKSGSSD LLAQFGIDLT MAPETARDCL DELGLCFLFA PHYHGGVAHA
VPVRQALKTR TLFNVLGPLI NPSRPDFMLL GVYSPELVAP IAQVVKALGI KRAMVVHGSG
LDEVALHGDT LVHELKDGAI SEYRITPAML GVPEAKLTDL EGGAPEENAD YTRAILQGKG
KAAHMNAVAI NAGCALYVAG ICTDIKSGTA LALETINSGK AYKLLTQLAN ASQAGKGA
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