| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1586 |
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| Symbol | |
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| ID | 5661983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1924162 |
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| End bp | 1925391 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641236174 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001501446 |
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| Protein GI | 157961412 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT TAAACCCATA CTTTGGGGAA TACGGTGGTA TGTACGTACC GCAAATTTTA
ATGCCAGCGC TTAAGCAACT AGAAACCGCT TTTATTGAAG CCCAAGAAGA CGAGAGCTTT
CAGCAGGAGT TTACCGAGCT TTTAAAGAAC TATGCCGGTC GTCCAACGGC GTTGACCTTA
ACGCGCAACT TAAGCCCTAA TCCGCTGACT AAGATCTATC TAAAACGTGA AGATTTGCTA
CACGGCGGCG CCCACAAGAC TAACCAAGTA TTAGGTCAGG CATTACTGGC TAAACGTATG
GGTAAAAAAG AGATCATCGC TGAAACTGGC GCGGGTCAAC ACGGTGTGGC AACAGCCCTT
GCCTGCGCAT TGCTAGGCCT TAAGTGTAAG GTGTATATGG GCGCGAAAGA CGTTGAACGT
CAATCACCAA ACGTATTTAG AATGAAGCTA ATGGGCGCAG AAGTTATCCC AGTGACCTCT
GGCTCGGCCA CTTTGAAAGA TGCCTGTAAC GAAGCGATGC GTGACTGGTC TGGTAGTTAT
GATAAAGCCC ACTACCTACT GGGCACTGCA GCAGGTCCGC ACCCATTCCC AACAATTGTA
CGTGAATTCC AACGTATGAT TGGCGAAGAA ACTAAGAGTC AAATTCTTGA GCGTGAAGGC
CGCCTACCTG ATGCGGTTAT TGCCTGTGTC GGCGGTGGTT CTAACGCGAT TGGTATGTTT
GCCGACTTTA TTGACGAAGA AGAGGTGGCA CTAATTGGTG TTGAGCCTGC AGGAAAAGGC
ATCGATACTC CAATGCACGG CGCGCCACTA AAGCATGGTA AAACTGGTAT TTTCTTTGGT
ATGAAAGCGC CACTTATGCA AGACAGCGAA GGGCAAATTG AAGAGTCTTA CTCTGTATCC
GCCGGTCTGG ATTTCCCATC TGTTGGGCCG CAGCATGCAC ACCTTGCCGC AACCGGCCGC
GCAACTTACG AGTCAGCCAC CGATGATGAA GCGTTAGAAG CTTTCCAATT ACTGGCACGA
TCAGAAGGGA TCATCCCCGC ACTTGAGTCG GCTCACGCCC TAGCTTATGC GGTAAAACTT
GCAAAAGAAG CCACCAAAGA GACCATTTTA GTGGTTAACC TGTCTGGCCG CGGCGACAAA
GATATCTTCA CGGTTGCGGA CATTCTTGAG CAACAAAAAG TTGAGCAACA AGAAGCTGAA
CAGCAACAAA CTAACAATCA GAACAACTAG
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| Protein sequence | MSKLNPYFGE YGGMYVPQIL MPALKQLETA FIEAQEDESF QQEFTELLKN YAGRPTALTL
TRNLSPNPLT KIYLKREDLL HGGAHKTNQV LGQALLAKRM GKKEIIAETG AGQHGVATAL
ACALLGLKCK VYMGAKDVER QSPNVFRMKL MGAEVIPVTS GSATLKDACN EAMRDWSGSY
DKAHYLLGTA AGPHPFPTIV REFQRMIGEE TKSQILEREG RLPDAVIACV GGGSNAIGMF
ADFIDEEEVA LIGVEPAGKG IDTPMHGAPL KHGKTGIFFG MKAPLMQDSE GQIEESYSVS
AGLDFPSVGP QHAHLAATGR ATYESATDDE ALEAFQLLAR SEGIIPALES AHALAYAVKL
AKEATKETIL VVNLSGRGDK DIFTVADILE QQKVEQQEAE QQQTNNQNN
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