| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1585 |
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| Symbol | trpA |
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| ID | 5661982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1923342 |
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| End bp | 1924151 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641236173 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001501445 |
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| Protein GI | 157961411 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAAC GTTACCAGGC AGCCTTTGCC GCCCTAAATG AGAAACAGCA AGGCGCATTT
GTGCCATTCG TGACCTTAGG CGATCCATCG CCTGAGCTAT CACTTAAAAT CATCGACACC
TTAGTTGAAA ACGGTGCCGA CGCCCTAGAG CTCGGCTTCC CGTTTTCAGA TCCGCTCGCC
GATGGCCCGG TTATTCAAGG CGCTAACCTA CGCTCTTTAG CTGCTGGCAC TACACCGACT
CAGTGCTTTG AAATGCTCAC GGCTATTCGA GCTAAATATC CTGACTTACC GATTGGCCTA
CTACTGTACG CCAATTTAGT GTTCGCCAAT GGCATCGATA CCTTCTACGC CAAATGCCAA
GCCGCTGGCG TTGACTCGGT ACTGATTGCC GATGTGCCAG TAGAGGAAGC AGCACCATTT
ATCGAATCGG CAAAAGCCCA CGGCGTGTGC CCAATCTTTA TCGCGCCGCC AAATGCCGAC
AGCGAAACAT TAAAACAGGT AAGTGAAAAA GGTGAAGGTT ATACCTACCT GTTATCTCGC
GCTGGTGTGA CGGGTACGGA GTCAAAGGCC GGTATGCCAA TCAGTGATAT TCTAAATCGT
CTAAAAGAGT TTAATGGTGC GCCGCCACTA CTAGGTTTTG GTATTGCCGA GCCGAGTCAG
GTCAAAGCCG CTATCGATGC TGGAGCCGCG GGCGCGATTT CAGGCTCTGC GGTAGTCAAA
ATTATCGAGG CGAATAAAGA CAATGAAGCG GCACTGTTAA GCGCCCTTGC TGAATTTACT
CGCAATATGA AAGCGGCAAC CGCTCGTTAA
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| Protein sequence | MSQRYQAAFA ALNEKQQGAF VPFVTLGDPS PELSLKIIDT LVENGADALE LGFPFSDPLA
DGPVIQGANL RSLAAGTTPT QCFEMLTAIR AKYPDLPIGL LLYANLVFAN GIDTFYAKCQ
AAGVDSVLIA DVPVEEAAPF IESAKAHGVC PIFIAPPNAD SETLKQVSEK GEGYTYLLSR
AGVTGTESKA GMPISDILNR LKEFNGAPPL LGFGIAEPSQ VKAAIDAGAA GAISGSAVVK
IIEANKDNEA ALLSALAEFT RNMKAATAR
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