Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1578 |
Symbol | |
ID | 5661975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1915527 |
End bp | 1916744 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236166 |
Product | Na(+)-translocating NADH-quinone reductase subunit F |
Protein accession | YP_001501438 |
Protein GI | 157961404 |
COG category | [C] Energy production and conversion |
COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGG CAATTGGTAT CGGTATGTTC ACCTTCGTGG TCAGCATATT GGTTATGGTG ATTTTATTCG CCAAGAGCAA ACTGGTTTCT ACGGGTGACG TTAATATTCG TATTAACGAC GATCCAGATA AGAGTATTTC GACCCAAGCG GGTGATAAAT TATTAGGCGC GTTAGCGGGC AAGAATATCT TTATCCCATC GGCCTGTGGT GGCGGTGGTA CATGTGGTCA ATGCCGCGTA AAAGTTAAAT CTGGCGGCGG TGAAATTTTA GCCACAGAAC GTGACCATAT TAATAAGAAA GAAGCCAAAG AAGGTTGTCG CTTAGCGTGT CAGGTATCGG TTAAAACCGA TATGGAACTG GAAGTTGAAG AAGAGATCTT CGGCGTAAAG AAATGGCAGT GTGAGGTTAT TTCAAATAAT AACCAAGCGA CTTTTATTAA AGAGTTACTG CTTAAATTGC CTGAAGGCGA AGACGTGCTG TTTAAAGCGG GCGGCTATAT TCAAATTGAA GCACCGGCTC ACGAAGTGAA GTATGCGGAT TTTGATATCC CAGCCGAGTA TCGTGATGAC TGGGAAAAAT ACGACCTATT CAAGCTAGTG TCAAAAGTTG ACGAAGATGT GCTGCGCGCA TACTCAATGG CGAACTACCC AGATGAGAAA GGCCGCATCA TGCTTAACGT GCGTATTGCT ACGCCGCCAA GCGACAATAT CGCTCCAGGT AAGATGTCAT CGTACATTTT CAATCTAAAA GCGGGTGATA AAGTCACTAT CTCTGGTCCA TTTGGTGAGT TCTTCGTTAA AGAAACTGAC GCTGAAATGG TATTTATTGG TGGTGGTGCG GGTATGGCGC CAATGCGCTC ACATATCTTC AATCAGCTTA AAGGTGTTAA AACCAAGCGT AAGATGAGCT TCTGGTATGG CGCGCGCTCA ACCCGTGAAG TCTTCTATCA AGATGATTTC GATACCTTAG CGGCAGAGAA CGATAATTTT GTTTGGCATG TGGCATTGTC AGATCCATTA CCAGAAGATA ACTGGACGGG TTACACGGGC TTTATCCATA ACGTGCTTTA TGAGAATTAT CTTAAAAATC ACAAAGCACC GGAAGATTGT GAGTTCTATA TGTGTGGCCC TCCAATCATG AACTCGTCAG TTATTGCGAT GCTCGAAAGC CTTGGAGTAG AGCCAGAGAA CATATTACTA GATGACTTTG GTGACTAG
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Protein sequence | MEMAIGIGMF TFVVSILVMV ILFAKSKLVS TGDVNIRIND DPDKSISTQA GDKLLGALAG KNIFIPSACG GGGTCGQCRV KVKSGGGEIL ATERDHINKK EAKEGCRLAC QVSVKTDMEL EVEEEIFGVK KWQCEVISNN NQATFIKELL LKLPEGEDVL FKAGGYIQIE APAHEVKYAD FDIPAEYRDD WEKYDLFKLV SKVDEDVLRA YSMANYPDEK GRIMLNVRIA TPPSDNIAPG KMSSYIFNLK AGDKVTISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF NQLKGVKTKR KMSFWYGARS TREVFYQDDF DTLAAENDNF VWHVALSDPL PEDNWTGYTG FIHNVLYENY LKNHKAPEDC EFYMCGPPIM NSSVIAMLES LGVEPENILL DDFGD
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