| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1576 |
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| Symbol | |
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| ID | 5661973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1914231 |
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| End bp | 1914854 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236164 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001501436 |
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| Protein GI | 157961402 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACTC AATCTATTTC GACTCGTGAA ATGTTAATTG GGCCAATTTT CACTAATAAC
CCAGTGGCCA TGCAAGTTTT GGGTGTCTGC TCAGCGTTAG CGGTCAGTAA CTCGATGCAG
ACTGCATTGG TGATGACGTT AGCCGTGACT TTTGTATTGG TGTTTTCAAA CCTGATTATC
TCAAGTATAC GTTCACTCAT TCCAAACAGC GTACGTATTA TCGCTCAGAT GACGGTGATT
GCATCTTTGG TGATAGTGGT GGATATGGTG TTGCAAGACG TGGCCTATGA ACTGTCGCGT
CAGTTATCAG TATTTGTCGG TCTGATCATC ACCAACTGTA TCATCATGGG CCGTGCAGAA
GCCTTTGCCA TGAAGAATCC GCCGCACTTA GCAGTGGTGG ATGCGTTTGG TAATGCCATT
GGATATGGCG TGATCTTACT GGGCGTGGCA TTTGTTCGTG AGTTATTGGG TAGCGGCACA
CTGTTTGGCC ATGAGATCTT ACAGACTGTG GAAAATGGCG GTTGGTACTT AACGAACGAG
ATGTTCAAGT TACCACCGAG TGCGTTCTTC TTAATTGGCC TGATGATCTG GTCAATTAAC
GTCATTCAAC GCAAGCGAGG TTAA
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| Protein sequence | MSTQSISTRE MLIGPIFTNN PVAMQVLGVC SALAVSNSMQ TALVMTLAVT FVLVFSNLII
SSIRSLIPNS VRIIAQMTVI ASLVIVVDMV LQDVAYELSR QLSVFVGLII TNCIIMGRAE
AFAMKNPPHL AVVDAFGNAI GYGVILLGVA FVRELLGSGT LFGHEILQTV ENGGWYLTNE
MFKLPPSAFF LIGLMIWSIN VIQRKRG
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