Gene Spea_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1572 
Symbol 
ID5661969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1908606 
End bp1910102 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content50% 
IMG OID641236160 
Producthypothetical protein 
Protein accessionYP_001501432 
Protein GI157961398 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTATCAA ACAGACTGCC CGCCTATATA TCATTACTCT TGGTTACAGC TTTACTGCAA 
CTGCTATTTT GTTGCGCCGA AAGCTACGCC AGTACAGCTC AAGAGCCAAG CATTGAAACT
CGGCCGCAAG TATTGGTCTT GGAGTTTGAG GGGGCCATAG GCCCTGCAAC CAGCGAATAC
TTAACCCACG GTATCGAGCA GGCAAACGCA AGCGCAGCAC TAGGAAATGG CGAAATAGAA
CTCATTGTTA TCGTGATGGA TACGCCTGGT GGCCTTGTTT CCAGCCTAAG AGATATCAAT
CAAACCATTT TAAACTCCTC TATTCCCATC GCCTGTTTAG TCGCGCCTCC CGGCGCAAGA
GCCGCGAGCG CGGGCACCTA TATTCTATAC GCATGTCATA TCGCTGCCAT GGCAGATGCC
ACCACCTTAG GCGCGGCAAC GCCCGTCAGC ATTGGCCCTG GAAGTGCCCC AACACCGGCA
CCAAAACCAG ATCAAAAAGA TGATGAAGAG CCAGCTCCCG CCACACCCAG TGCCATGGAG
AAGAAAATCC TCAACGATGC AATCGCCTAT ATACGTGCAC TTGCACAGCT TCGCGGCCGT
AATGAGCAAT GGGCGGAACT CGCCGTAAAA GAAGCGGCGA CCCTCACCGC AAAAGAGGCC
CTCGAAATGA ATGTCATTAA TCTCATCAGC CCTGATGCGC CGCGGCTAGT CGCCGAGCTT
ACAGGCTGGC AAGTTGAGAT AGAAAATCGA CAACTGACAT TGGCATTAGA CAATGCAGAA
CTACATTATT TAAAACCCGA TTGGCGTAAC CGTATTATCT CCACCATAAC CAACCCCAAT
GTGGCTTACA TTTTAATGTT AATCGGAATT TACGGCATCT TACTGGAGTT CTATAGCCCA
GGTATTGGAA TTGCAGGGAT CACAGGTGCC ATTAGCTTAC TGGTTGCTTT ATATGCGTTT
CAGATGTTGC CGGTTAGCTA TGCAGGGCTG GGGCTTTTAC TGCTGGGACT GGCGTTGATC
ACTATCGAAT CTTTTGCCCC CAGCTTTGGC ATATTCGGCA TTGGAGGTAT TGCTGCCTTT
GCCATCGGCT CGCTGTTTTT ACTCGATACC GAAACCGATC ACTTTGCCCT TTCTCTGCCA
CTCGTCGCCG CGGTATCGGT CGCTGTCGCC TTAATGTCGT TATTAGTGCT TGGCACATTA
TGGCGAAATC GAAAATCGCC CATCGTCAGT GGTGATGGTC AGATAGTGGG CCAAACTGCA
ATTGTAGTCG ATGACTTTAC GCCCTCAACT GAAGAGGTGA AGGTGCTAAT GAGCAGCGCT
TTTAACGACC GACACCTTAG TCATAACGGC TTTGTGTTGC TCCATGGAGA AGTCTGGGCG
GCAAGCTCAG ACTCAGCACT TAAAAAAGCG CAGCAAGTGA CGGTTATTGT ACGTCACGAC
CTTTCATTGG AGGTCGAACT GACTCCAGTT TCTAATCAAG AAGCACTAAA TAGCTAA
 
Protein sequence
MLSNRLPAYI SLLLVTALLQ LLFCCAESYA STAQEPSIET RPQVLVLEFE GAIGPATSEY 
LTHGIEQANA SAALGNGEIE LIVIVMDTPG GLVSSLRDIN QTILNSSIPI ACLVAPPGAR
AASAGTYILY ACHIAAMADA TTLGAATPVS IGPGSAPTPA PKPDQKDDEE PAPATPSAME
KKILNDAIAY IRALAQLRGR NEQWAELAVK EAATLTAKEA LEMNVINLIS PDAPRLVAEL
TGWQVEIENR QLTLALDNAE LHYLKPDWRN RIISTITNPN VAYILMLIGI YGILLEFYSP
GIGIAGITGA ISLLVALYAF QMLPVSYAGL GLLLLGLALI TIESFAPSFG IFGIGGIAAF
AIGSLFLLDT ETDHFALSLP LVAAVSVAVA LMSLLVLGTL WRNRKSPIVS GDGQIVGQTA
IVVDDFTPST EEVKVLMSSA FNDRHLSHNG FVLLHGEVWA ASSDSALKKA QQVTVIVRHD
LSLEVELTPV SNQEALNS