Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1566 |
Symbol | |
ID | 5661963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1902474 |
End bp | 1903436 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236154 |
Product | integral membrane protein TerC |
Protein accession | YP_001501426 |
Protein GI | 157961392 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCTTAA GTGAACTCTT TTCAGGTTAT CAAGGCCTAG TCATACTTAC TCTGTTGATG CTTGGCATCG ATTTATTGCT CACAAGAGGT AAGATCAGTT TTCGTTCTGC TGCCGTTTGG AGTGTATTCT GGTTTTCGCT GGCTTTTCTG TTTGCTGGCG CTATTTACCT TTTTTGGCCA GAAATGTCGC CAACTAGTCA GCTTTCTTCA AGCGAAGCTA GCACGGCATT TATTACTGGT TATCTTCTTG AAAAATCTCT GAGTGTCGAT AATCTATTTG TTTTCGCACT CATCTTTACT CAATTCAACG TACCCGATAA AAACGTCCCG AGGATTTTGA TGTTAGGTAT CGTGGGTGCT TTAGTATTAC GCGGCATCAT GATTTCCGTC GGCGCTCCGC TTATTGCACA GTTCCACATG ATACTTTATC TGTTCGGCTT CTTCTTGATT TGGACTGGTG TGCAAATGTG GCGTCAGCAT GATCAAGACA ACTCATCGTT TTCAGATAGT TTCGCCGTCC GTTTGGTGAA GAAATTTATG CGGATCAGCC CTGACTACCA TGGGAATAAG CTCTTTATCC GAGACGGCAT CGGCATATTA GCCACGCCGA TGCTAGTGGT CGTCACGGTC ATAGCAATGA CAGATATAAT GTTTGCCCTC GACTCAATCC CAGCTATCTT TGCGGTAACA CAGGAGGCGT ACTTGGTACT TGCTGCGAAC GTCTTTGCCT TATTAGGTCT ACGATCGCTG TACTTTGTTC TCGGCGGAAT GTTGACCAAA TTTGCTTATT TACATCATAC ATTAGCATTC ATGCTTTGCT TTATTGGTAC CAAGATGCTG CTGATTGATA CGCCGTTTGC TATTGCAACC CCTGTCTCTC TAGGGGTTAT TTTAGCTTCG CTGACAGCAG GTATTGGAGC CTCTATTTGG AAGCAACACC AATTGAAAAA AGTAAATCAA TAA
|
Protein sequence | MFLSELFSGY QGLVILTLLM LGIDLLLTRG KISFRSAAVW SVFWFSLAFL FAGAIYLFWP EMSPTSQLSS SEASTAFITG YLLEKSLSVD NLFVFALIFT QFNVPDKNVP RILMLGIVGA LVLRGIMISV GAPLIAQFHM ILYLFGFFLI WTGVQMWRQH DQDNSSFSDS FAVRLVKKFM RISPDYHGNK LFIRDGIGIL ATPMLVVVTV IAMTDIMFAL DSIPAIFAVT QEAYLVLAAN VFALLGLRSL YFVLGGMLTK FAYLHHTLAF MLCFIGTKML LIDTPFAIAT PVSLGVILAS LTAGIGASIW KQHQLKKVNQ
|
| |