Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1561 |
Symbol | |
ID | 5661958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1895194 |
End bp | 1895838 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236149 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001501421 |
Protein GI | 157961387 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAGA AAACTCCCCC AAAAGGCATT GCTGAACAAG CGACGGAAAA AGCCGCCGAA CAAAATGTTC GAGTAGCGCT TATCCGTGCT GCTAACCAAT GCTTTACCGC TTCAGATTAT GATAGCGTCA GCATTAGGAA AATTGCGCAG CAGGCTGGCG TTAACATGGC GATGATCCGT TATTACTTTG GTAATAAGTT AGGACTATTT GAAGCCATGG TGACTGAGCA GATCCATCCT ATCCATCAAA GGGCTAAGAC GCTGCAAAAG CATCAAGCTA AGCCTACGAT CGCAGATCTG ATCAATGAGT TTTACCAAAC CATGATCCCT AATCCAGATT TCCCCCGTTT TTTATTTCGC TTAATGAACT CAGATGGCTC AAGTGAGGCT AAAGAGGTTA TTTTTAAACT CTTTACGCCT ATTGTTGAGC TGACGCCTAT GCCCAAAGCG TTACTCGAAG AGTGCGGTGA CTTCGACCCT ATGATGGTGA AGATGTCGTT ACTCAGCCTT ATGATTTTTC CCTTTGTCAT GCCGTTATCA ATGGCAAAAC TGCACGGTTA TCAACTTAAT GATGAATTTT ATACTCAATT GGCCAAACAC AATATTGCAC TTATCCAGCA CGGACTCTTT GGAGGTCAGC AATAA
|
Protein sequence | MSEKTPPKGI AEQATEKAAE QNVRVALIRA ANQCFTASDY DSVSIRKIAQ QAGVNMAMIR YYFGNKLGLF EAMVTEQIHP IHQRAKTLQK HQAKPTIADL INEFYQTMIP NPDFPRFLFR LMNSDGSSEA KEVIFKLFTP IVELTPMPKA LLEECGDFDP MMVKMSLLSL MIFPFVMPLS MAKLHGYQLN DEFYTQLAKH NIALIQHGLF GGQQ
|
| |