| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1558 |
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| Symbol | |
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| ID | 5661955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1892573 |
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| End bp | 1894123 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641236146 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001501418 |
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| Protein GI | 157961384 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTAG CCAAGTTTGT ACAGGGATCG ATTCTGCGCC ATATTTTTGT GATGAGTTCC
ACCGCGGCTA TCGGTATTTC GGCGCTGTTT GTGGTCGACT TATTGGATAT ATTCTTCCTC
AGTTTACTGG GGGAGCAGGA GCTTGCCGCG GCAGTTGGCT ACGCTGGCAC CATCTCATTC
TTTACCACTT CAATAGGCAT CGGCCTCTCT ATTGCTCTTG GGGCTTTGGT GTCGCGCTCA
ATTGGCGCTA AAGAGAGTGA AAAGGCTAAG CGATTACTAT TAAACAGTCT CGTTGTGACC
TTGTTAATGA GCCTGTTTGT CGCATTTAGC GTGTATATGT TTATTCCAGA GCTGTTGAGA
CTGGTGGGCG CGACAGGCAG AACCGCCGAG CTTGCCGAGA GTTATCTTAA TATTCTGGTG
CCTTCCTTGC CGCTTATCTG TCTAGCGATG GCGCTCGGTA GTGCCTTGAG GGCGGTGGGC
GATGCCAAGT TGTCTATGGT GTCGACCTTA GTCGGTGGTG GCGTAAATGC GGTTTTTGAC
CCGATATTTA TCTTCATGTT TGCCATGGGA ATTGAAGGTG CAGCCGTAGC TTCAGTAATG
GCTCGTTTTG CCGTGTTTGC GGTTGCGGCA AGGGGCGTTG TGGTCAAGCA CAACCTATTG
GGTCGCTTTA ATTTTGATCA CTTTGTTGAA GATTTATCTC CTATCTTTGC TATCGCAGGT
CCCGCTATGC TCACTAACGT GGCCACCCCT ATCGGTAATG CGGTGGTGAC TCGCGCCATC
GCAGATTTTG GTGATAGTTA TGTGGCTGGC TGGGCAGTGC TTGGGCGCCT CATTCCGGTG
TCGTTTGGTA TGATCTTCGC CTTATCCGGG GCCATCGGGC CGATTGTTGG CCAGAACTAT
GGCGCGTTGC AGTTTGAGCG GGTGAAAGAG TCGCTCACCC GAGCGATCCA ATTTTGCGCC
GTCTATGTAT TGGCTGTGTC GCTGCTATTG TTTTTAACAC GCCATCAAAT AGTAAGTGTG
TTTGATATGA AAGGTGATGC GGCGGATTTG ATCTTGTTCT TCTGCTCGTT TATCGCGGTG
TTCTTTATCT TCTCAGGTGT TTTATTCGTC GCCAATGCCT CATTTAATAA CTTAGGCAAG
GCCAAGTATT CGACTCTGTT TAATGTGGGT AAGGCAACAT TAGGCACCAT TCCATTCGTT
TATTTTGGTG CTAAGTGGGG CGGGGTTTAC GGCGTGTTGA TTGGTCAGGC GGTAGGCTCG
ATTATTTTCG GTATCGCGGG TGTGCTTGTG GCGTACCGAT TGGTTGAACG GGTTAAGGCG
GCAGCTGTTG TAACTGTTGC TGATGACGTC GCTGATTTCG CGAAGGACAC GGCTAAAGAT
AAGACGAAAG ATAAGAGCGA GTTTGATGAG GAGCTAAGCT TGAGTGGTCA AAGTCCACTT
TCTTCCTCTT GTGCCAACAT GGCAATAGTC AATGAGGAGC AAGACTGTGT GGGAAGTAAT
GAAGTAGCTG AGCTTATTGG CGTTAAAGAG GAGAGTACTC CTAGCAAATA A
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| Protein sequence | MAVAKFVQGS ILRHIFVMSS TAAIGISALF VVDLLDIFFL SLLGEQELAA AVGYAGTISF
FTTSIGIGLS IALGALVSRS IGAKESEKAK RLLLNSLVVT LLMSLFVAFS VYMFIPELLR
LVGATGRTAE LAESYLNILV PSLPLICLAM ALGSALRAVG DAKLSMVSTL VGGGVNAVFD
PIFIFMFAMG IEGAAVASVM ARFAVFAVAA RGVVVKHNLL GRFNFDHFVE DLSPIFAIAG
PAMLTNVATP IGNAVVTRAI ADFGDSYVAG WAVLGRLIPV SFGMIFALSG AIGPIVGQNY
GALQFERVKE SLTRAIQFCA VYVLAVSLLL FLTRHQIVSV FDMKGDAADL ILFFCSFIAV
FFIFSGVLFV ANASFNNLGK AKYSTLFNVG KATLGTIPFV YFGAKWGGVY GVLIGQAVGS
IIFGIAGVLV AYRLVERVKA AAVVTVADDV ADFAKDTAKD KTKDKSEFDE ELSLSGQSPL
SSSCANMAIV NEEQDCVGSN EVAELIGVKE ESTPSK
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