| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1546 |
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| Symbol | |
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| ID | 5661943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1882713 |
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| End bp | 1883429 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236134 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001501406 |
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| Protein GI | 157961372 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0365689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGCG AGTTAAAAAT GAATCAAGAA TTACTGCTAC AAGTTAGTCA CGTTAGCAAA
CGTTATCAAG AAGGCTCAGT CGATACCCAG GTTTTACATG ACGTTGAGCT ACAAGTCTTT
AAAGGCGAGC AATTAGCGAT TGTGGGTAGC TCAGGCTCGG GCAAGAGTAC CTTACTGCAT
ATTATGGGGA CCCTAGATAG CCCAACGAGT GGTAGCGTGA CCATGTTAGG CGAAGACTTA
TATAAACTGT CGAGCCAGCG TCAAGCACAG ATCCGCAACG AGAACCTTGG CTTTATCTAT
CAGTTCCACC ATCTGTTACC GGAATTTACT GCTCTTGAAA ATGTCTCAAT GCCAGCGCTT
ATTCAAGGTA AGAGTCGAAA GCAAGTAGAG GCCAAGGCCA AATCCCTGCT TGAGCGAGTG
GGGCTAGCCC ATCGACTGAG TCATACTCCG GCCGAGATGT CGGGCGGTGA ACGCCAACGA
GTGGCGATAG CAAGAGCCTT GATTAATGAT CCTAAGTTAG TTTTGGCCGA TGAGCCGACA
GGTAATTTAG ATGCGAATAG TGGCGAAGCC GTTTATGAGC TGATCACCGA GCTTGCGGCG
CAGCTTGGCA CCGCATTTGT TGTGGTCACC CATGATCAAA GCTTAGCTGC CAGAATGGAT
AGACAGCTGC ATATGAAAGA TGGCCACCTA GTGCAAGCTG AGGAACTAAC TGCATGA
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| Protein sequence | MNSELKMNQE LLLQVSHVSK RYQEGSVDTQ VLHDVELQVF KGEQLAIVGS SGSGKSTLLH
IMGTLDSPTS GSVTMLGEDL YKLSSQRQAQ IRNENLGFIY QFHHLLPEFT ALENVSMPAL
IQGKSRKQVE AKAKSLLERV GLAHRLSHTP AEMSGGERQR VAIARALIND PKLVLADEPT
GNLDANSGEA VYELITELAA QLGTAFVVVT HDQSLAARMD RQLHMKDGHL VQAEELTA
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