Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1542 |
Symbol | |
ID | 5661939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1876020 |
End bp | 1877027 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236130 |
Product | hypothetical protein |
Protein accession | YP_001501402 |
Protein GI | 157961368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000050026 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAGAC TATCTAAAAA CAAGCTAAGC GCAGCTTTAG CTGTTAGCCT TTTATCCAGC TTATCTGTGA GCGCTAACGC TGCAGAAGAA CGTTGGTTTG AGGTCGAAGT CTATCTCTTT GAGCGCGATG CACCGAGCGT TGAACAGTGG CCAGCTAAAG TCGCACAGGC TCGTACACGT AAGACTGTCG ACTTTATTAC TCCAATGGTC AGCACCGACT TAACAGCCGT TAGCATGGGA CTTAACGGTT GTACTTCAAG CGATTGGGCA ACCGATAGCG TGAACTGTAA TGAGCAACTT AGCAAAGCGA ACCATAAGGC TTTAGCCGAT GTACCGATGC AAATTGCGGC CCCACAGCCT GCCGTTGCGC ATTTAGGTGA TGGCGCGGTG TTACTCGCTG AAAGTCAAAG CCAATTCAAA GATATTATCG CGACCATTTC TCGCGAAAAA GGCACGTCTA GCCTTTTGCA TATGACATGG CAACAATCAA TGCTCCCTCG CAGCCAAGCG ATCCCTGTCA AACTATACTC GGGGCATGAC TACTCAGAGC AATATGAGTT TAACGGGCAA CCAATTGAGG TTAACACTAG CGCTTCAGAG TTTGGCAACT TCGACTTTAT GCAGAGTCAA TTCTCAAACG ATACCAAAAC ACCGATCTGG AAGCTCGATG GGACGGTAAA TATTTATTTG CAGCATTACC TGTTTATTGA AACTAATTTC ACCTTACGCG AAGAAGGCAG TAAGACGATA ACCCTGACAC AAAATGAGCC GTTAATGAGC GCTCGTGAAG AAGGCGGTGT AGATGAAACG GTGGGTCAAG AAGTGACGAA ACCTTATCTC TATGCCATTG AGATGCAGCA AAACCGCAGA GTGCGTAGTG ATGAAGTCCA CTACTTTGAT CACCCCAAAA TGGGCATGAT CATTCAGATT CGAAAAATGG AACATCCGAG TGCAATGACT GACAAGTCAA CAGATGAAAT CGCGACCTTG CCACAGGCTA CATATTAG
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Protein sequence | MLRLSKNKLS AALAVSLLSS LSVSANAAEE RWFEVEVYLF ERDAPSVEQW PAKVAQARTR KTVDFITPMV STDLTAVSMG LNGCTSSDWA TDSVNCNEQL SKANHKALAD VPMQIAAPQP AVAHLGDGAV LLAESQSQFK DIIATISREK GTSSLLHMTW QQSMLPRSQA IPVKLYSGHD YSEQYEFNGQ PIEVNTSASE FGNFDFMQSQ FSNDTKTPIW KLDGTVNIYL QHYLFIETNF TLREEGSKTI TLTQNEPLMS AREEGGVDET VGQEVTKPYL YAIEMQQNRR VRSDEVHYFD HPKMGMIIQI RKMEHPSAMT DKSTDEIATL PQATY
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