Gene Spea_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1532 
Symbol 
ID5661929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1861254 
End bp1862582 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content46% 
IMG OID641236120 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001501392 
Protein GI157961358 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000132104 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTA CGAAAACTAA AAAACTCGGC CTCACGAGTA AGATAATTAT CGGTATGTTT 
ACCGGTATTA TTCTCGGACT CTTACTACGC AATCTGTTTC CAGAGAGTGA CTTTATCAAA
GAGTACATCA CTGAGGGTGT GCTAAATGTA ATCGGTACTA TCTTTATCTC AAGCTTGAAA
ATGCTTGTTG TTCCTCTTGT CTTTGTTTCA TTAGTCTGTG GTACTTGTTC GCTAAGTGAA
CCCTCTAAAG TAGGTCGCTT AGGTGGCAAG ACCATCGCGT TTTATCTATT CACCACAGCC
ATTGCCCTTT CAATGGCGAT TCTAGTTGCC ATTGCTATCC ACCCTGGCAA TGCCAGTATG
GTGACTGAAG GAATGCAGTT TGACGTCAAG CAGGCCCCAA GCCTTTCTGA TGTACTTATT
AATCTTGTGC CTACCAACCC ACTGCATGCG ATGAGTGAAG GTAATATGCT GCAGATCATC
ATCTTTGCGG TGATCTTTGG TTTTGCTATC TCGCATATTG GTGAACGTGG TGCGCGTGTC
GCAGCACTGT TTAACGACCT TAACGAAGTG ATCATGCGTG TTGTAACACT TATCATGCAA
CTTGCTCCTT ACGGCGTGTT TGCCCTGATG GCAAAATTGG CGCTCACACT GGGGATGGAA
ACCTTTGGCA GTGTCGTTAA ATACTTCTTC GTAGTACTAG GTGTGTTACT TGTTCATGCA
TTCGTGGTGT ACCCGGTGCT GCTTAAAGTG TTCTCTGGGC TCAACCCATT CACCTTTATC
CGTAAAATCC GTGACGTACA GCTATTTGCA TTTAGTACAG CGAGTTCAAA CGCGACGCTG
CCTGTGACTA TTGAGACTGC AGAGCACCGT ATGGGCGTGG ATAATAAGAT TGCCTCTTTC
ACCCTGCCAC TTGGTGCGAC TATTAACATG GATGGCACCG CGATCATGCA AGGCGTTGCG
ACCGTCTTTA TTGCCCAAGT CTTTGGTATC GAGCTAACAA TTACCGATTA CGCTATGGTT
GTTGTTACAG CAACGCTTGC CTCTATCGGT ACTGCCGGTG TACCTGGTGT GGGTCTAATC
ATGCTTGCCA TGGTACTGAA CCAAGTCGGT CTGCCTGTTG AGGGTATCGC GCTGATTATT
GGTGTAGATA GACTGCTGGA TATGGTGCGT ACAGCGGTTA ACGTAACCGG TGATACAGTA
GCAACTGTGG TGATTGCTAA ATCTGAAAAT GAGTTTAACG AAGAGATCTT CAATGATACT
CAAGCGGGTA AAGTCGCTCC AGGTTTCAAC GCTCAAGTTC ATGCTGAAGA AATGAAGTTG
AACAAGTAA
 
Protein sequence
MSATKTKKLG LTSKIIIGMF TGIILGLLLR NLFPESDFIK EYITEGVLNV IGTIFISSLK 
MLVVPLVFVS LVCGTCSLSE PSKVGRLGGK TIAFYLFTTA IALSMAILVA IAIHPGNASM
VTEGMQFDVK QAPSLSDVLI NLVPTNPLHA MSEGNMLQII IFAVIFGFAI SHIGERGARV
AALFNDLNEV IMRVVTLIMQ LAPYGVFALM AKLALTLGME TFGSVVKYFF VVLGVLLVHA
FVVYPVLLKV FSGLNPFTFI RKIRDVQLFA FSTASSNATL PVTIETAEHR MGVDNKIASF
TLPLGATINM DGTAIMQGVA TVFIAQVFGI ELTITDYAMV VVTATLASIG TAGVPGVGLI
MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDTV ATVVIAKSEN EFNEEIFNDT
QAGKVAPGFN AQVHAEEMKL NK