Gene Spea_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1531 
Symbol 
ID5661928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1860585 
End bp1861139 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID641236119 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001501391 
Protein GI157961357 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000154529 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT ACGAAAAAAT GCTCAATGGT AAAATCTTTG CCGGTGCGGA TCCTGAAATT 
TCAGCTGTAC GAGACAATGC CTATTTATTG CAAAAGCAAA TCAACAATAG TCTAGGTTTT
AGCGAAACCC TGTGCTTGAT AAAGCAATTG CTCAACAGTA TTGGTGAGGG CTCGATTGTA
CGAGAGCCGT TTAATTGTGA ATTTGGCAAG CAGATTACGA TTGGTAACGG TAGCTTCATT
AATATGGGGG CTGTGATGCT CGATGGCGCG AAAATTACCA TAGGTAATCA GGTTATGGTG
GGACCAAGTT GTCAGTTTTA CACCGCATCC CATGCTATAG ATTATTTAAG TCGTCGCAGG
TGGGAGACTT TTTGCTTACC GATCACCATT GAAGATGATG TCTGGATTGG TGGCAATGTG
GTGATCAATC AAGGTGTGAC TATTGGTGCA CGTTCTATCG TTGCTGCTGG ATCTGTTGTA
AATAAAGATG TACCTGCAGA CTGTATGGTC GGCGGTGTAC CCGCAAGAAT ATTGAAGCAG
CTTAATGTTG CTTAA
 
Protein sequence
MTEYEKMLNG KIFAGADPEI SAVRDNAYLL QKQINNSLGF SETLCLIKQL LNSIGEGSIV 
REPFNCEFGK QITIGNGSFI NMGAVMLDGA KITIGNQVMV GPSCQFYTAS HAIDYLSRRR
WETFCLPITI EDDVWIGGNV VINQGVTIGA RSIVAAGSVV NKDVPADCMV GGVPARILKQ
LNVA