Gene Spea_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1523 
Symbol 
ID5661920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1850469 
End bp1851605 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content43% 
IMG OID641236111 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_001501383 
Protein GI157961349 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGA CAGTGATAGC CGAGCAAGTA TTTAATGGTC GAGAGATCTT GAAAGATCAG 
CCAATCACTT TCCAAGATGG CAAAGTGATC GCTTTTGATA GCGTAAATAA TGCAAAAGAA 
TTCAAAATTT CGGGATTATT AACCCCAGGC TTTATTGACG TTCAAGTTAA TGGTGGTGGC 
GGCTATTTGT TTAATCAGCA AACTCACTTA ACGGCTCTCG AAGCTATGGT GCATGCCCAC 
AGTCGTTATG GCACCACATG GCTACTTCCA ACGCTAATTA CCAGTGATTT AACCACATTA 
AACAATGCCG CAAATACTAT CGCTGACGCC ATTAAAAAAC GGCTTCCAGG CGTTATAGGT 
GTTCACTTTG AAGGACCGCA TATCAGCGAG CCAAAAAAAG GGATCCACAA TAGCCAGCAC 
ATTAGGGCCC TAAGTGATCA AGAAATGGCA GTGTATTGCC GTAACGACCT AGGTATCAAA 
GTGGTCACCA TCGCACCAGA GTGTGTGACA ACAGAGCAAG TAAAATCGCT AATAGCACAC 
AATGTTAAAG TATGTTTAGG CCACTCCAAT GCAAGCTTTG AACTCACTCA AGCAGCGCTT 
GATGCTGGCG CAATCGGGTT TACTCATCTA TTTAATGCTA TGTCGCCACT CACATCCCGA 
GACCCCAATA TGCTCGGCGC TGCACTTCTT GATAAGAATA GCTGGTGTGG CCTTATCTTA 
GACGGCCATC ACGTGCATCC TGCATCGGCA AAGCTTGCTA CCAAAGTTAA AAGCAATGGA 
AAAATGATGT TAGTGACAGA TGCAATGTCT ACCATTGGTA GCAACCAACA AACATTTGAG 
TTTGATGGTC ATCAAATACA ACTCAGCACT AATAAGTTAA CCAGCCAAAC CGGTCAATTA 
GCAGGCTCAG CATTAGATAT GATAACGGCG GTCAACAACG CCCAAACCAT GCTAGATATT 
TCACTAGAAG AGTCTCTAAG AATGGCAAGT GTGTATCCAG CAGACTTTCT CGGCATTAAT 
ACAGCCACGC AATTACTTGC AATAGGCGCA AATGCAGACT TCACCGTACT TGAAAAGAGT 
AGTCAAACAA GTTTACACGT AAGCCAAACA TGGATTGATG GCAAACAAAT ATTTTAA
 
Protein sequence
MITTVIAEQV FNGREILKDQ PITFQDGKVI AFDSVNNAKE FKISGLLTPG FIDVQVNGGG 
GYLFNQQTHL TALEAMVHAH SRYGTTWLLP TLITSDLTTL NNAANTIADA IKKRLPGVIG 
VHFEGPHISE PKKGIHNSQH IRALSDQEMA VYCRNDLGIK VVTIAPECVT TEQVKSLIAH 
NVKVCLGHSN ASFELTQAAL DAGAIGFTHL FNAMSPLTSR DPNMLGAALL DKNSWCGLIL 
DGHHVHPASA KLATKVKSNG KMMLVTDAMS TIGSNQQTFE FDGHQIQLST NKLTSQTGQL 
AGSALDMITA VNNAQTMLDI SLEESLRMAS VYPADFLGIN TATQLLAIGA NADFTVLEKS 
SQTSLHVSQT WIDGKQIF