| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1520 |
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| Symbol | |
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| ID | 5661917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1847348 |
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| End bp | 1848220 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236108 |
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| Product | ROK family protein |
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| Protein accession | YP_001501380 |
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| Protein GI | 157961346 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.969416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCA CAATTGATGT TGGCGGCACC AAGATATCGG CTGCGTTAAT CAAGGGGACT
AAAGTCATTA AGGTTAGGAA AGTTGATTCA ATTATCCATC AAGACTTAGC TAACCTTGCA
AGTTACCTTG TTAACTTATG TGAAGGTTGG GCAGAGCAGG CGTTTACGGT TGCGGTAGCC
TGTACTGGGC TTGTGGGAGC AGAGCGAGTT AACTTTTTAT CTGCAAACGA TTCGCTACCG
CTAAAGCAGC AACTTGAAAT AGGCTTTGGT TTACCTGTTG TTATGTTAAA CGATGCTGCC
GCTGCAGCCT GGGCTGAATA TACCTTAAGG CTTGATAGAA CAGACAATAC TTTGGCCTAC
ATTACCGTTT CAACCGGTGT GGGTGGTGGC ATTGTTCAAA ATGGCAAGTT AGTGATGGCC
GATGATGGGT TTTGTGCGCA CATTGGGCAT ATGTCAGTTA GTCGGCCAGA CTTGCCTGTA
ATTGAGTGTC ATTGTGGCAG GTTTAACTGT GTAGAGGCCC TATCTTCAGG GACGGCTATC
GCTAATCAAG CGTCAAGTAT TTTAAATAAA GGTGTTAGCT GCAAAACCGT TTTTAATGAG
CATTTATCCC ATCCAGAAAT AGCCCTGTTA CTAGAGCAGG CAACTGATAG CATTGTTGAG
CTTATCGCTA ACATTAGAGC CTTAACAGGA ACACGAGTCG TGGTGTTAGG CGGCAGTGTC
GGCTCTACAA ACTTATTCCA AGAGCGAATA AAAACCAAAT TAAAGGCACT TCCTAAAATC
TACCACGTCG AACTCCTTGC CCCTGTCTCT GGAGAGCATG CCGACCTTAT TGGCGCAGCT
TTGTACGCCG GTTCGGTAAT CGGTTGTGAT TAA
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| Protein sequence | MIITIDVGGT KISAALIKGT KVIKVRKVDS IIHQDLANLA SYLVNLCEGW AEQAFTVAVA
CTGLVGAERV NFLSANDSLP LKQQLEIGFG LPVVMLNDAA AAAWAEYTLR LDRTDNTLAY
ITVSTGVGGG IVQNGKLVMA DDGFCAHIGH MSVSRPDLPV IECHCGRFNC VEALSSGTAI
ANQASSILNK GVSCKTVFNE HLSHPEIALL LEQATDSIVE LIANIRALTG TRVVVLGGSV
GSTNLFQERI KTKLKALPKI YHVELLAPVS GEHADLIGAA LYAGSVIGCD
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