Gene Spea_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1517 
Symbol 
ID5661914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1842935 
End bp1843639 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content40% 
IMG OID641236105 
Producttranscriptional regulator NanR 
Protein accessionYP_001501377 
Protein GI157961343 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.822162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTA CTATTAAACG TCCTGTTGAA CGAAAAAAAC TTTCAGAAAC CGTTGAAGAA 
GAATTGGAAC AGATGATACG CCAAGGTGAA ATAGCCGAAG GTGAAGCGCT GCCGTCTGAA 
AGAGAGTTAA TGGCGGCATT TGGAGTGGGC AGGCCTTCAA TTCGCGATGC CTTGTCAGCA 
CTTGCACGCA AAGGCTTAGT TAAAATTAGC AGCGGTGAAC GAACTCGTGT GAGTAGACCT 
TCTCCTGAAA CCATTATTTC TGAGCTATCA GGAATGTCAA AAGACTTTCT ATCGCAGCCT 
AACGGATTGC AATATTTTGA TCAGCTAAGA AGCTTCTTTG AATCGAGCTT AGTGCGCCAT 
GCGGCAGAGT TTGCAACAAG TGAACAAATT GAAGAGTTAG AAAAAGCGGT CGCATTAAAT 
GGCAAAGCAA TAGATAACGA AAGCCAATTT AAAAAAACCG ATATCTATTT TCACCATGTC 
ATAGCATCTA TACCTGGCAA CCCCATTTTT TTGGCCATTC ACCAAGCGCT AGTTGATTGG 
GTTATTGATG CTAGACCGGC TAAAACCAAC GTTAAAGAGT TAAACGCTAA AAGCCATCAA 
GACCATGTCG ATATTTTAGA ATGCATTAAA AATCGTGATG TAGAGGGAGC GGATAAAAAG 
TTAACTCAAC ACATACAATA TGTATTTGAT AAGTATTACG ATTAG
 
Protein sequence
MPITIKRPVE RKKLSETVEE ELEQMIRQGE IAEGEALPSE RELMAAFGVG RPSIRDALSA 
LARKGLVKIS SGERTRVSRP SPETIISELS GMSKDFLSQP NGLQYFDQLR SFFESSLVRH 
AAEFATSEQI EELEKAVALN GKAIDNESQF KKTDIYFHHV IASIPGNPIF LAIHQALVDW 
VIDARPAKTN VKELNAKSHQ DHVDILECIK NRDVEGADKK LTQHIQYVFD KYYD